RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 A0A1W2PPK0 400 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 HTR3BO95264 441 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 CSTBP04080 98 aaKnown RBP12.82□□□□□ -0.36
CCDC78-216ENST00000544996 IGFBP3P17936 291 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-216ENST00000544996 FSTP19883 344 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 OR3A4PP47883 348 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 SLC35A2P78381 396 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 SPHARQ15513 63 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 Q6P435 159 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 ASCL4Q6XD76 172 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 BEND2Q8NDZ0 799 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 OR5R1Q8NH85 324 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 ZNF184Q99676 751 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-216ENST00000544996 PPA2Q9H2U2 334 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 FOXJ3Q9UPW0 622 aa12.82□□□□□ -0.36
CCDC78-216ENST00000544996 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-216ENST00000544996 TRBV5-7A0A0A0MS05 114 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-216ENST00000544996 RGS10O43665 173 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 ZNF780AO75290 641 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-216ENST00000544996 CDRT1O95170 752 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 ATP6V1G2O95670 118 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 CSN2P05814 226 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 IGHV1-8P0DP01 117 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 AESQ08117 197 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 IL13RA2Q14627 380 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 MED22Q15528 200 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 GDPGP1Q6ZNW5 385 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 MS4A15Q8N5U1 240 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 Q8NFD4 153 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 OR51T1Q8NGJ9 327 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 OR10K1Q8NGX5 313 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 DERL3Q96Q80 235 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 GAL3ST2Q9H3Q3 398 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 IL36GQ9NZH8 169 aa12.81□□□□□ -0.36
CCDC78-216ENST00000544996 TRAV8-7A0A075B6U6 113 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 A0A1B0GUS0 222 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 POM121CA8CG34 1229 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 GPR137BO60478 399 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 CLPXO76031 633 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 MAS1P04201 325 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 ARG1P05089 322 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 GLIPR1P48060 266 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 DOC2BQ14184 412 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 GPR176Q14439 515 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 PAN3Q58A45 887 aaKnown RBP12.8□□□□□ -0.36
CCDC78-216ENST00000544996 KRBOX4Q5JUW0 171 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 TCF23Q7RTU1 214 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 CDH26Q8IXH8 852 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 OSR2Q8N2R0 312 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 JAGN1Q8N5M9 183 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 OR4F5Q8NH21 305 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 CNBD2Q96M20 576 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 OR5M11Q96RB7 305 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
CCDC78-216ENST00000544996 BARHL1Q9BZE3 327 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 CCDC90BQ9GZT6 254 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 ING3Q9NXR8 418 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 VPREB3Q9UKI3 123 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 ST3GAL6Q9Y274 331 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 SESN1Q9Y6P5 492 aa12.8□□□□□ -0.36
CCDC78-216ENST00000544996 ODAMA1E959 279 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 HSPB6O14558 160 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 GTF2F2P13984 249 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 SERPINA2P20848 420 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 OMGP23515 440 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 CRHBPP24387 322 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 RAG2P55895 527 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 DYNC1I2Q13409 638 aaKnown RBP12.79□□□□□ -0.36
CCDC78-216ENST00000544996 GPR50Q13585 617 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 ATXN7L3Q14CW9 347 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-216ENST00000544996 TAF9Q16594 264 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 PIGYQ3MUY2 71 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 SLC22A6Q4U2R8 563 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 OR52W1Q6IF63 320 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 OR11H6Q8NGC7 330 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 SGCDQ92629 289 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 CORO2AQ92828 525 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 SSX3Q99909 188 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 MEGF9Q9H1U4 602 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 BEX1Q9HBH7 125 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 OR6C3Q9NZP0 311 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 C1RLQ9NZP8 487 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 BLOC1S6Q9UL45 172 aa12.79□□□□□ -0.36
CCDC78-216ENST00000544996 LSM2Q9Y333 95 aaKnown RBP12.79□□□□□ -0.36
CCDC78-216ENST00000544996 TBL2Q9Y4P3 447 aaKnown RBP12.79□□□□□ -0.36
CCDC78-216ENST00000544996 MEGF11A6BM72 1044 aa12.78□□□□□ -0.36
CCDC78-216ENST00000544996 MAGEA13PA6NCF6 341 aa12.78□□□□□ -0.36
CCDC78-216ENST00000544996 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-216ENST00000544996 NDUFA7O95182 113 aa12.78□□□□□ -0.36
CCDC78-216ENST00000544996 VHLP40337 213 aa12.78□□□□□ -0.36
CCDC78-216ENST00000544996 KCNJ3P48549 501 aa12.78□□□□□ -0.36
CCDC78-216ENST00000544996 RBM11P57052 281 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms