RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 IKZF5Q9H5V7 419 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 KRCC1Q9NPI7 259 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ACTR3BQ9P1U1 418 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 AASSQ9UDR5 926 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 GLS2Q9UI32 602 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 LINC00527Q9UJ94 153 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 STUB1Q9UNE7 303 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 VSIG4Q9Y279 399 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 MRPS28Q9Y2Q9 187 aaKnown RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 POLDIP2Q9Y2S7 368 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 RHBDD3Q9Y3P4 386 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 N6AMT1Q9Y5N5 214 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 IER3IP1Q9Y5U9 82 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 LINC00312Q9Y6C7 94 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ALMS1Q8TCU4 4167 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 RYR1P21817 5038 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 PLECQ15149 4684 aaKnown RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 MAGEA13PA6NCF6 341 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 OR5B21A6NL26 309 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF850A8MQ14 1090 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF732B4DXR9 585 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 LINC01619G3V211 115 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 H0Y980 276 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 BUB1B-PAK6H3BSN5 160 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 I3L521 148 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 DCTN6O00399 190 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CDC42EP2O14613 210 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ARPC1BO15143 372 aaKnown RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 TYROBPO43914 113 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 NOS1APO75052 506 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 DEDDO75618 318 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 NXPH2O95156 264 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CNIH1O95406 144 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 FAM90A13PP0C7W8 464 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 FAM90A24PP0C7X0 464 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 SLC2A1P11166 492 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 PSMB8P28062 276 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CDKN2AP42771 156 aaKnown RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 GPR4P46093 362 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CX3CR1P49238 355 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 GPM6AP51674 278 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CCR9P51686 369 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 PITPNAQ00169 270 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 HES1Q14469 280 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 HLA-DRB5Q30154 266 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CEACAM21Q3KPI0 293 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CEP78Q5JTW2 689 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 PAGE3Q5JUK9 113 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 TPTE2P1Q5T6R2 138 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 HAGHLQ6PII5 290 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CEMP1Q6PRD7 247 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 DCXRQ7Z4W1 244 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ANKRD13BQ86YJ7 626 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 OR8H2Q8N162 312 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ASCC1Q8N9N2 400 aaKnown RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 OR5A2Q8NGI9 324 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 TRMT10AQ8TBZ6 339 aaKnown RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 MYOZ3Q8TDC0 251 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 HPSE2Q8WWQ2 592 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 AQP3Q92482 292 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 PIGCQ92535 297 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 DCUN1D4Q92564 292 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 TOMM40LQ969M1 308 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 RPEQ96AT9 228 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 SGK3Q96BR1 496 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 TSSK2Q96PF2 358 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 NR1H4Q96RI1 486 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 TMED9Q9BVK6 235 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ABCG5Q9H222 651 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 OR51I2Q9H344 312 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 GAL3ST2Q9H3Q3 398 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 NIPAL2Q9H841 368 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 RPRD1BQ9NQG5 326 aaKnown RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CENPMQ9NSP4 180 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 OR14J1Q9UGF5 321 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CD300AQ9UGN4 299 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 LGALS13Q9UHV8 139 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF580Q9UK33 172 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 SLC22A13Q9Y226 551 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 SIGLEC7Q9Y286 467 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 AMMECR1Q9Y4X0 333 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-220ENST00000544550 CEPT1Q9Y6K0 416 aa3.13□□□□□ -1.91
SNHG1-220ENST00000544550 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 A0A087WUU8 490 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 J3QT63 122 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 ARPC3O15145 178 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 MPZL2O60487 215 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 RBMXL2O75526 392 aaKnown RBP3.12□□□□□ -1.91
SNHG1-220ENST00000544550 NDUFB8O95169 186 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 IGLV1-51P01701 117 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 TNFRSF1BP20333 461 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 CD34P28906 385 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 SLC6A6P31641 620 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 GLIPR1P48060 266 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 RAB7AP51149 207 aa3.12□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF121P58317 390 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-220ENST00000544550 ZP1P60852 638 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms