RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 RIPK1Q13546 671 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 IL13RA2Q14627 380 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 ZNF626Q68DY1 528 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 ASPHD2Q6ICH7 369 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 OR52W1Q6IF63 320 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 LAIR2Q6ISS4 152 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 Q6P435 159 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 ASCL4Q6XD76 172 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 LIAT1Q6ZQX7 453 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 TPRX1Q8N7U7 411 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 Q8NFD4 153 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 OR51T1Q8NGJ9 327 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 TAF15Q92804 592 aaKnown RBP eCLIP18.9■□□□□ 0.62
CHFR-222ENST00000544093 CORO2AQ92828 525 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 MALSU1Q96EH3 234 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 AJUBAQ96IF1 538 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 S100A13Q99584 98 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 PCDHB16Q9NRJ7 776 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 TAS2R3Q9NYW6 316 aa18.9■□□□□ 0.62
CHFR-222ENST00000544093 FAM90A8PA6NJQ4 464 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 ODF3BA8MYP8 253 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 SLC33A1O00400 549 aaPredicted RBP18.89■□□□□ 0.61
CHFR-222ENST00000544093 GPX5O75715 221 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 PTGFRP43088 359 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 SCN1BQ07699 218 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 DDI2Q5TDH0 399 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 DTX3Q8N9I9 347 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 C17orf50Q8WW18 174 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 WFDC12Q8WWY7 111 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 PGLYRP3Q96LB9 341 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 PPA2Q9H2U2 334 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 VCX3BQ9H321 246 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 FKBP14Q9NWM8 211 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 IL36GQ9NZH8 169 aa18.89■□□□□ 0.61
CHFR-222ENST00000544093 NKX1-2Q9UD57 310 aaPredicted RBP18.89■□□□□ 0.61
CHFR-222ENST00000544093 VGLL3A8MV65 326 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 ZNF780AO75290 641 aaPredicted RBP18.88■□□□□ 0.61
CHFR-222ENST00000544093 FSTP19883 344 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 C21orf33P30042 268 aaPredicted RBP18.88■□□□□ 0.61
CHFR-222ENST00000544093 BDH1Q02338 343 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 RNLSQ5VYX0 342 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 METTL9Q9H1A3 318 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 TMEM133Q9H2Q1 129 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 C16orf95Q9H693 158 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 ZNF696Q9H7X3 374 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 SCN3BQ9NY72 215 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 RNF114Q9Y508 228 aa18.88■□□□□ 0.61
CHFR-222ENST00000544093 ODAMA1E959 279 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 TSPAN9O75954 239 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 IGFBP3P17936 291 aaPredicted RBP18.87■□□□□ 0.61
CHFR-222ENST00000544093 KCNJ3P48549 501 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 AESQ08117 197 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 DYNC1I2Q13409 638 aaKnown RBP18.87■□□□□ 0.61
CHFR-222ENST00000544093 KRBOX4Q5JUW0 171 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 PRR31Q5SQ13 230 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 MINOS1Q5TGZ0 78 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 HEPN1Q6WQI6 88 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 LINC00596Q86U02 117 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 NANOGP1Q8N7R0 232 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 LINC01006Q8NI28 216 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 MYDGFQ969H8 173 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 CDCA4Q9BXL8 241 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 CLEC7AQ9BXN2 247 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 NCOR1P1Q9H4R4 102 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 OR6C3Q9NZP0 311 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 MINOS1-NBL1R4GNA1 71 aa18.87■□□□□ 0.61
CHFR-222ENST00000544093 KIAA2026Q5HYC2 2103 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 IGHV2-26A0A0B4J1V2 119 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 MEX3AA1L020 520 aaKnown RBP18.86■□□□□ 0.61
CHFR-222ENST00000544093 CSTBP04080 98 aaKnown RBP18.86■□□□□ 0.61
CHFR-222ENST00000544093 MAPK3P27361 379 aaPredicted RBP18.86■□□□□ 0.61
CHFR-222ENST00000544093 RPS11P62280 158 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHFR-222ENST00000544093 NHLRC3Q5JS37 347 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 Q6ZSV7 163 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 RTN4RL2Q86UN3 420 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 ZFP41Q8N8Y5 198 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 OR13C5Q8NGS8 318 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 NR1H4Q96RI1 486 aaPredicted RBP18.86■□□□□ 0.61
CHFR-222ENST00000544093 MND1Q9BWT6 205 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 BARHL1Q9BZE3 327 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 FOXJ3Q9UPW0 622 aa18.86■□□□□ 0.61
CHFR-222ENST00000544093 HTR3BO95264 441 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 CDK1P06493 297 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 CELP19835 753 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 OR3A4PP47883 348 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 GLIPR1P48060 266 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 PAX5Q02548 391 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 GPR176Q14439 515 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 PAN3Q58A45 887 aaKnown RBP18.85■□□□□ 0.61
CHFR-222ENST00000544093 C6orf141Q5SZD1 244 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 LHFPL4Q7Z7J7 247 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 CDH26Q8IXH8 852 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 ZNF565Q8N9K5 539 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 ZNF184Q99676 751 aaPredicted RBP18.85■□□□□ 0.61
CHFR-222ENST00000544093 IFT22Q9H7X7 185 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 ABCB10Q9NRK6 738 aa18.85■□□□□ 0.61
CHFR-222ENST00000544093 TRBV5-7A0A0A0MS05 114 aa18.84■□□□□ 0.61
CHFR-222ENST00000544093 ZNF729A6NN14 1252 aaPredicted RBP18.84■□□□□ 0.61
CHFR-222ENST00000544093 AQP4P55087 323 aa18.84■□□□□ 0.61
CHFR-222ENST00000544093 ATXN7L3Q14CW9 347 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms