RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MED12Q93074 2177 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 NSG1A0A0A6YYJ2 146 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 A0A0G2JMM0 328 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF816-ZNF321PA0A0X1KG74 233 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 A0A1B0GW64 132 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 A0A1W2PPB8 328 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 A0A1W2PRS3 328 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A10PA6NDY2 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A18PA6NE21 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A16PA6NEW6 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A20PA6NIJ5 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A8PA6NJQ4 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 LRRC3CA6NJW4 275 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF98A6NK75 572 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A7PA6NKC0 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A22PA8MWA6 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 KIR3DP1A8MWS1 328 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A12PA8MX19 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A5PA8MXJ8 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 VSTM5A8MXK1 200 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A23PA8MXZ1 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FARS2O95363 451 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 IGHEP01854 428 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A15PP0C7V4 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A13PP0C7W8 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A14PP0C7W9 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM90A24PP0C7X0 464 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CCL4P13236 92 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TDGF1P13385 188 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 B4GALT1P15291 398 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TCN2P20062 427 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 DUSP1P28562 367 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CD80P33681 288 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 HTR5AP47898 357 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 KCNJ3P48549 501 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 RAB5CP51148 216 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CLDN15P56746 228 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 RBM11P57052 281 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CARD18P57730 90 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PCBD1P61457 104 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CTAG1AP78358 180 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PEA15Q15121 130 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SP6Q3SY56 376 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ABCA11PQ4W5N1 156 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM76BQ5HYJ3 339 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SLC22A25Q6T423 547 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 COLCA1Q6ZS62 124 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 AAED1Q7RTV5 226 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PPP1R32Q7Z5V6 425 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 C1orf210Q8IVY1 113 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 LGI3Q8N145 548 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM156Q8N614 296 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 C15orf54Q8N8G6 183 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OR2V1Q8NHB1 315 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 AKR7LQ8NHP1 331 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FGFBP3Q8TAT2 258 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 DYRK2Q92630 601 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TOMM40LQ969M1 308 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM45BQ96B21 275 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 JSRP1Q96MG2 331 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FOXB1Q99853 325 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SYT3Q9BQG1 590 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 C1QTNF5Q9BXJ0 243 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TUBA4BQ9H853 241 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF286AQ9HBT8 521 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 GPR35Q9HC97 309 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SMCO4Q9NRQ5 59 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ATPIF1Q9UII2 106 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FBXO9Q9UK97 447 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ST3GAL6Q9Y274 331 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 STRAPQ9Y3F4 350 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TMED3Q9Y3Q3 217 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SPTBN4Q9H254 2564 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 IGKV3D-15A0A087WSY6 115 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 BORCS7-ASMTA0A0B4J1R7 106 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CLEC18AA5D8T8 446 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 PRSS44E7EML9 344 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 K7N7A8 449 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 ST8SIA3O43173 380 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 XRCC2O43543 280 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CXCL13O43927 109 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CYTIPO60759 359 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CDS2O95674 445 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 IFNA4P05014 189 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 PATE4P0C8F1 98 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 FUT3P21217 361 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 AADACP22760 399 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 FOLR3P41439 243 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 RND3P61587 244 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 Q0VFX4 171 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 MALLQ13021 153 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 HABP2Q14520 560 aaPredicted RBP4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CEACAM16Q2WEN9 425 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 RNF212Q495C1 297 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 MIDNQ504T8 468 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 PHLDA2Q53GA4 152 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 TSPO2Q5TGU0 170 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 YRDCQ86U90 279 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms