RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 N6AMT1Q9Y5N5 214 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 ORC6Q9Y5N6 252 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 NPTNQ9Y639 398 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM14AQ9Y6G1 99 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 YLPM1P49750 1951 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ACOD1A6NK06 481 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ANKRD30BLA7E2S9 258 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 CD300LBA8K4G0 201 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 PHYHO14832 338 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF254O75437 659 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 FOXH1O75593 365 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 UPK1BO75841 260 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 MSMBP08118 114 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 OR2T7P0C7T2 308 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 CTRB1P17538 263 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 IGFBP5P24593 272 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ERP29P30040 261 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 OTX1P32242 354 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 SRP14P37108 136 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 RPS27P42677 84 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 CX3CR1P49238 355 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 THBS3P49746 956 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 S100A12P80511 92 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 CDK10Q15131 360 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 OR8G1Q15617 311 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TIMM50Q3ZCQ8 353 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM155Q4W5P6 130 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 FAM120AOSQ5T036 256 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 AVPI1Q5T686 147 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 C6orf183Q5T699 404 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 LINC01590Q5TEZ4 76 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 NXNL2Q5VZ03 156 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM236Q5W0B7 351 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 KDM4DQ6B0I6 523 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 CTRB2Q6GPI1 263 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 DEGS2Q6QHC5 323 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 Q6ZR03 302 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 KCTD8Q6ZWB6 473 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 MEPCEQ7L2J0 689 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 SLC16A9Q7RTY1 509 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 LRRC28Q86X40 367 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 COMMD2Q86X83 199 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 GID4Q8IVV7 300 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TIGD4Q8IY51 512 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 C8orf59Q8N0T1 100 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 RHOXF1Q8NHV9 184 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 OTOSQ8NHW6 89 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 RNF133Q8WVZ7 376 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ITLN1Q8WWA0 313 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ASB17Q8WXJ9 295 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 GTF3AQ92664 365 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM186Q96B77 213 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ZMYND19Q96E35 227 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 OR2V2Q96R30 315 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TEAD3Q99594 435 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 RBM4BQ9BQ04 359 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ABHD6Q9BV23 337 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 GABARAPL1Q9H0R8 117 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 DPAGT1Q9H3H5 408 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF665Q9H7R5 613 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 MED20Q9H944 212 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ABCB9Q9NP78 766 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 TREM2Q9NZC2 230 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ZMAT5Q9UDW3 170 aaKnown RBP4.47□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF391Q9UJN7 358 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 PEX16Q9Y5Y5 336 aa4.47□□□□□ -1.69
CPSF7-220ENST00000541963 PPIAL4EA0A075B759 164 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 A0A0G2JMP0 313 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 A0A0X1KG70 313 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 SNTNA6NMZ2 147 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF670-ZNF695F2Z2N8 137 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 PPIAL4DF5H284 164 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 F5H5P2 479 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 J3QLI3 93 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 CCNKO75909 580 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 FSTL3O95633 263 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 IGHV2-5P01817 119 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 LIPFP07098 398 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 PPIAL4FP0DN26 164 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ALOX5APP20292 161 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 PRKACBP22694 351 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 CA6P23280 308 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 IL2RGP31785 369 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ATP6V1E1P36543 226 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 MDH2P40926 338 aaKnown RBP4.46□□□□□ -1.7
CPSF7-220ENST00000541963 OPRL1P41146 370 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ETV6P41212 452 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 CD200P41217 278 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF121P58317 390 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-220ENST00000541963 CDC42P60953 191 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 LMO4P61968 165 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 BTG1P62324 171 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 CTAG1AP78358 180 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF92Q03936 586 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 SNAI3Q3KNW1 292 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 ZFP69Q49AA0 526 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 SMUG1Q53HV7 270 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 TMEM255AQ5JRV8 349 aa4.46□□□□□ -1.7
CPSF7-220ENST00000541963 GLYATL3Q5SZD4 288 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms