RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IL36RNQ9UBH0 155 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 STEAP1Q9UHE8 339 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 AK6Q9Y3D8 172 aaKnown RBP15.51■□□□□ 0.07
VPS33A-205ENST00000541169 MTORP42345 2549 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 TMEM82A0PJX8 343 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 IFITM5A6NNB3 132 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 SIRPB1O00241 398 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 SLC33A1O00400 549 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-205ENST00000541169 PSPNO60542 156 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 CRTAPO75718 401 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-205ENST00000541169 OR7C1O76099 320 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-205ENST00000541169 TOX4O94842 621 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 RBP4P02753 201 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 GADD45AP24522 165 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 SNU13P55769 128 aaKnown RBP15.5■□□□□ 0.07
VPS33A-205ENST00000541169 CROCCP3Q8IVE0 287 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 YIPF6Q96EC8 236 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 WDFY2Q96P53 400 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 METTL8Q9H825 291 aaKnown RBP15.5■□□□□ 0.07
VPS33A-205ENST00000541169 METRNQ9UJH8 293 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 TEP1Q99973 2627 aaKnown RBP15.5■□□□□ 0.07
VPS33A-205ENST00000541169 WNK2Q9Y3S1 2297 aa15.5■□□□□ 0.07
VPS33A-205ENST00000541169 NOTOA8MTQ0 251 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 AIPO00170 330 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 AIREO43918 545 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 TFF1P04155 84 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 CALCBP10092 127 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 EDDM3BP56851 147 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 PIGYQ3MUY2 71 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 PAN3Q58A45 887 aaKnown RBP15.49■□□□□ 0.07
VPS33A-205ENST00000541169 METAP1DQ6UB28 335 aaPredicted RBP15.49■□□□□ 0.07
VPS33A-205ENST00000541169 OR13F1Q8NGS4 319 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 URM1Q9BTM9 101 aaKnown RBP15.49■□□□□ 0.07
VPS33A-205ENST00000541169 TMEM59Q9BXS4 323 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 SELENOIQ9C0D9 397 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 OR51E2Q9H255 320 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 UNKLQ9H9P5 680 aaKnown RBP15.49■□□□□ 0.07
VPS33A-205ENST00000541169 OPN4Q9UHM6 478 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 LINC00312Q9Y6C7 94 aa15.49■□□□□ 0.07
VPS33A-205ENST00000541169 LOC100506127A0A0U1RQW1 187 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 GEMIN2O14893 280 aaKnown RBP15.48■□□□□ 0.07
VPS33A-205ENST00000541169 CA11O75493 328 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 IFNA2P01563 188 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 VSIG8P0DPA2 414 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 OR3A1P47881 315 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 P2RX3P56373 397 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 SCAND1P57086 179 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 NCR3LG1Q68D85 454 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 FAM185AQ8N0U4 392 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 OR4S1Q8NGB4 309 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 SLC25A28Q96A46 364 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 PTX4Q96A99 478 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 FAM3DQ96BQ1 224 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 Q96M66 194 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 GFI1Q99684 422 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 SIRPDQ9H106 197 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 OR6C3Q9NZP0 311 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 ONECUT1Q9UBC0 465 aa15.48■□□□□ 0.07
VPS33A-205ENST00000541169 UBE2J1Q9Y385 318 aaPredicted RBP15.48■□□□□ 0.07
VPS33A-205ENST00000541169 ARHGAP32A7KAX9 2087 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 TMEM14DPA8MWL7 114 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 FUT3P21217 361 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 FPR2P25090 351 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 RIPPLY3P57055 190 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 ARF6P62330 175 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 RPS27AP62979 156 aaKnown RBP15.47■□□□□ 0.07
VPS33A-205ENST00000541169 GUCA2AQ02747 115 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 TMEM200BQ69YZ2 307 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 ZNF565Q8N9K5 539 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 NKX3-1Q99801 234 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-205ENST00000541169 DPCDQ9BVM2 203 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-205ENST00000541169 TM2D1Q9BX74 207 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 CHST6Q9GZX3 395 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 C19orf12Q9NSK7 152 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 NUP50Q9UKX7 468 aa15.47■□□□□ 0.07
VPS33A-205ENST00000541169 TRGV10A0A0A0MS01 117 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 TRAV24A0A0B4J272 114 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 MCRIP1C9JLW8 97 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 MPIG6BO95866 241 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 FSHBP01225 129 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 MMP9P14780 707 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 QRFPP83859 136 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 TAF9Q16594 264 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 KRBOX4Q5JUW0 171 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 ATAD3CQ5T2N8 411 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 GPR157Q5UAW9 335 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 C1orf229Q6ZS94 237 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-205ENST00000541169 FGFRL1Q8N441 504 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 SUMF2Q8NBJ7 301 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 TMEM104Q8NE00 496 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 CORO2AQ92828 525 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 PCGF1Q9BSM1 259 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 PPA2Q9H2U2 334 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 GAL3ST2Q9H3Q3 398 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 BANF2Q9H503 90 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 TAS2R3Q9NYW6 316 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 RCC2Q9P258 522 aaKnown RBP15.46■□□□□ 0.07
VPS33A-205ENST00000541169 RAB22AQ9UL26 194 aa15.46■□□□□ 0.07
VPS33A-205ENST00000541169 AVPP01185 164 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms