RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CARFQ8N187 725 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 ATG101Q9BSB4 218 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 TWSG1Q9GZX9 223 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 CRYAAP02489 173 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 CCR2P41597 374 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 Q1RN00 199 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 C17orf78Q8N4C9 275 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 VSTM2LQ96N03 204 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 TLNRD1Q9H1K6 362 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 FAM157BP0CG42 384 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 TMEM255AQ5JRV8 349 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 ELOVL1Q9BW60 279 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 MFRPQ9BY79 579 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 MSL2Q9HCI7 577 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 GPR27Q9NS67 375 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 PAM16Q9Y3D7 125 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 RCC1P18754 421 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 C16orf82Q7Z2V1 217 aa13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-207ENST00000541122 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 FCGR3BO75015 233 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 MPZL1O95297 269 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 MT-ND6P03923 174 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 BCL3P20749 454 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 ZNF880Q6PDB4 577 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 OR1P1Q8NH06 330 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 TXNDC17Q9BRA2 123 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 TMEM204Q9BSN7 226 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 SCN4AP35499 1836 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 FAM87AP0C7U9 286 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 CBLN3Q6UW01 205 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 REC114Q7Z4M0 266 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 OR10AC1Q8NH08 325 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 A0A1W2PPC1 479 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 NKX2-6A6NCS4 301 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 SP1P08047 785 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 HOXB1P14653 301 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 ZNF32P17041 273 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 CSRP3P50461 194 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 TSPO2Q5TGU0 170 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 BRS3P32247 399 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 PSG6Q00889 435 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 NINQ8N4C6 2090 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 CYB561D1Q8N8Q1 229 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 ZBTB34Q8NCN2 500 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 FBXO17Q96EF6 278 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 ADTRPQ96IZ2 230 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 PGLYRP3Q96LB9 341 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 P2RX4Q99571 388 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 HSPB8Q9UJY1 196 aa13.2□□□□□ -0.3
SMARCA4-207ENST00000541122 LAMB2P55268 1798 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 BMP5P22003 454 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 AGFG1P52594 562 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 VN1R17PQ8TDU5 208 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 SDHCQ99643 169 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 HYAL3O43820 417 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 PDCD1Q15116 288 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 FAM219AQ8IW50 185 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 GAPTQ8N292 157 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 DTD1Q8TEA8 209 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 GNB4Q9HAV0 340 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 OR1A1Q9P1Q5 309 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 FOCADQ5VW36 1801 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 SLX4Q8IY92 1834 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 COL18A1P39060 1754 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 TRGC2P03986 189 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 NANOS3P60323 173 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 MENTQ9BUN1 341 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 KCNE5Q9UJ90 142 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 PROCRQ9UNN8 238 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 PAGE4O60829 102 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 CXorf1O96002 111 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 ANKRD55Q3KP44 614 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 SARAFQ96BY9 339 aa13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 CARHSP1Q9Y2V2 147 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-207ENST00000541122 TTC3P53804 2025 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 LMO7DNF2Z398 122 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 PRSS41Q7RTY9 318 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 OR5AC2Q9NZP5 309 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 A8MXK9 166 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 H3BMH7 237 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms