RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 HCP5Q6MZN7 132 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 ZNF782Q6ZMW2 699 aaPredicted RBP8.43□□□□□ -1.06
CDCA3-208ENST00000540683 SLC16A12Q6ZSM3 486 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 C11orf42Q8N5U0 333 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 SPACA1Q9HBV2 294 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 TMEM138Q9NPI0 162 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 DPM3Q9P2X0 92 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 TCF19Q9Y242 345 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 MYRFQ9Y2G1 1151 aa8.43□□□□□ -1.06
CDCA3-208ENST00000540683 IGKV1-9A0A0C4DH69 117 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 ODAMA1E959 279 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 EFCAB10A6NFE3 127 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 ERICH4A6NGS2 130 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 NPBWR2P48146 333 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 BDH1Q02338 343 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 SLC34A1Q06495 639 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 SCN1BQ07699 218 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 SSX2Q16385 188 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 LY6EQ16553 131 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 ZNF691Q5VV52 312 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 SATL1Q86VE3 508 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 BATF2Q8N1L9 274 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 ABHD12Q8N2K0 398 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 DHRSXQ8N5I4 330 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 OR4S1Q8NGB4 309 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 OR10A7Q8NGE5 316 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 OR52I1Q8NGK6 324 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 OR52N1Q8NH53 320 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 TMEM106AQ96A25 262 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 CHST6Q9GZX3 395 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 BABAM2Q9NXR7 383 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 DIMT1Q9UNQ2 313 aaKnown RBP8.42□□□□□ -1.06
CDCA3-208ENST00000540683 ZNF281Q9Y2X9 895 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 DSCAML1Q8TD84 2053 aa8.42□□□□□ -1.06
CDCA3-208ENST00000540683 A0A0G2JK05 382 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 TMEM82A0PJX8 343 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 F8VVB4 439 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 F8VWA3 439 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 SIRPB1O00241 398 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 XPNPEP2O43895 674 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 PSPNO60542 156 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 LPLP06858 475 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 GZMHP20718 246 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 CDK2P24941 298 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 MAPK3P27361 379 aaPredicted RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 CD34P28906 385 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 OR3A1P47881 315 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 EFNB2P52799 333 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 PAX5Q02548 391 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 CDK5R1Q15078 307 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 PAN3Q58A45 887 aaKnown RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 YIF1BQ5BJH7 314 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 CDH26Q8IXH8 852 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 STX19Q8N4C7 294 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 OR4F17Q8NGA8 305 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 TNFAIP8L1Q8WVP5 186 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 CYGBQ8WWM9 190 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 RFT1Q96AA3 541 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 SMIM19Q96E16 107 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 MRPS24Q96EL2 167 aaKnown RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 TMEM80Q96HE8 168 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 OR4F4Q96R69 305 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 NKX3-1Q99801 234 aaPredicted RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 PDCD1LG2Q9BQ51 273 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 FAM192AQ9GZU8 254 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 METTL9Q9H1A3 318 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 ISG20L2Q9H9L3 353 aaKnown RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 LIN7BQ9HAP6 207 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 IL36GQ9NZH8 169 aa8.41□□□□□ -1.06
CDCA3-208ENST00000540683 CNOT2Q9NZN8 540 aaKnown RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 TET2Q6N021 2002 aaPredicted RBP8.41□□□□□ -1.06
CDCA3-208ENST00000540683 KBTBD11-OT1A0A1B0GTJ5 212 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 FAM106CPP0CH98 169 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 DUSP1P28562 367 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 ZNF93P35789 620 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-208ENST00000540683 SNU13P55769 128 aaKnown RBP8.4□□□□□ -1.06
CDCA3-208ENST00000540683 MPV17LQ2QL34 196 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 TMEM30BQ3MIR4 351 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 NHLRC3Q5JS37 347 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 C8orf59Q8N0T1 100 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-208ENST00000540683 Q8N2B8 174 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 OR52N4Q8NGI2 321 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 OR51A4Q8NGJ6 313 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 OR51T1Q8NGJ9 327 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 OR5D18Q8NGL1 313 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 OR9G1Q8NH87 305 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 RNF166Q96A37 237 aaPredicted RBP8.4□□□□□ -1.06
CDCA3-208ENST00000540683 SLC29A1Q99808 456 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 IFT22Q9H7X7 185 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 AMBNQ9NP70 447 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 MEGF8Q7Z7M0 2845 aa8.4□□□□□ -1.06
CDCA3-208ENST00000540683 MEIKINA0A087WXM9 373 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 A0A087X0M5 115 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 A0A1B0GX30 115 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 A6NDX4 124 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 H0YJX3 145 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 SLC33A1O00400 549 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms