RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 OR52W1Q6IF63 320 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 RPL22L1Q6P5R6 122 aaKnown RBP16.9■□□□□ 0.3
CHFR-217ENST00000540537 HEPN1Q6WQI6 88 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 Q8N2B8 174 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 PXT1Q8NFP0 134 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 ZNF702PQ9H963 129 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 HILPDAQ9Y5L2 63 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 IRGMA1A4Y4 181 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 CSF1P09603 554 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 HTR1DP28221 377 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 GLIPR1P48060 266 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 GTF2A1P52655 376 aaPredicted RBP16.89■□□□□ 0.29
CHFR-217ENST00000540537 SCN1BQ07699 218 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 CDK5R1Q15078 307 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 PRAMEF5Q5TYX0 476 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 ELP2Q6IA86 826 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 RTN4RL2Q86UN3 420 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 OR4P4Q8NGL7 312 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 GPR148Q8TDV2 347 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 CFHR4Q92496 578 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 RGP1Q92546 391 aaPredicted RBP16.89■□□□□ 0.29
CHFR-217ENST00000540537 FOXJ3Q9UPW0 622 aa16.89■□□□□ 0.29
CHFR-217ENST00000540537 ODAMA1E959 279 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 F2RL2O00254 374 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 DEGS1O15121 323 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 MAGEB3O15480 346 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 CDK2P24941 298 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 ETV1P50549 477 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 SLC34A1Q06495 639 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 PDLIM3Q53GG5 364 aaPredicted RBP16.88■□□□□ 0.29
CHFR-217ENST00000540537 KRBOX4Q5JUW0 171 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 TMPRSS11AQ6ZMR5 421 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 TMEM219Q86XT9 240 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 ABHD12Q8N2K0 398 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 FAM110DQ8TAY7 271 aaPredicted RBP16.88■□□□□ 0.29
CHFR-217ENST00000540537 ZNF596Q8TC21 504 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 COQ2Q96H96 371 aa16.88■□□□□ 0.29
CHFR-217ENST00000540537 CD2P06729 351 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 CD34P28906 385 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 PTGFRP43088 359 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 SOX2P48431 317 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 BDH1Q02338 343 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 OR51A2Q8NGJ7 313 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 CNIH3Q8TBE1 160 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 GPER1Q99527 375 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 C8orf4Q9NR00 106 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 TAS2R4Q9NYW5 299 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 DPM3Q9P2X0 92 aa16.87■□□□□ 0.29
CHFR-217ENST00000540537 FAM90A22PA8MWA6 464 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 GABRPO00591 440 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 VSIG10L2P0DP72 767 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 JUNBP17275 347 aaPredicted RBP16.86■□□□□ 0.29
CHFR-217ENST00000540537 IL13RA2Q14627 380 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 ATXN7L3Q14CW9 347 aaPredicted RBP16.86■□□□□ 0.29
CHFR-217ENST00000540537 OR2G6Q5TZ20 316 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 TTC23Q5W5X9 447 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 XAF1Q6GPH4 301 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 BAIAP2L2Q6UXY1 529 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 Q8NFD4 153 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 OR4D6Q8NGJ1 314 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 OR51T1Q8NGJ9 327 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 TNFAIP8L1Q8WVP5 186 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 PRSS22Q9GZN4 317 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 SERTAD4Q9NUC0 356 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 OR6C3Q9NZP0 311 aa16.86■□□□□ 0.29
CHFR-217ENST00000540537 DIMT1Q9UNQ2 313 aaKnown RBP16.86■□□□□ 0.29
CHFR-217ENST00000540537 EXOSC1Q9Y3B2 195 aaKnown RBP16.86■□□□□ 0.29
CHFR-217ENST00000540537 ZNF729A6NN14 1252 aaPredicted RBP16.85■□□□□ 0.29
CHFR-217ENST00000540537 H0YJX3 145 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 H3BUI4 141 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 CLIC3O95833 236 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 ALDOBP05062 364 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 GDNFP39905 211 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 SATL1Q86VE3 508 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 PACRGLQ8N7B6 248 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 SETD9Q8NE22 299 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 CYGBQ8WWM9 190 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 TMEM106AQ96A25 262 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 SMIM19Q96E16 107 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 NCOR1P1Q9H4R4 102 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 BABAM2Q9NXR7 383 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 ING3Q9NXR8 418 aa16.85■□□□□ 0.29
CHFR-217ENST00000540537 OGG1O15527 345 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 IGLV1-47P01700 117 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 MYL12AP19105 171 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 HABP2Q14520 560 aaPredicted RBP16.84■□□□□ 0.29
CHFR-217ENST00000540537 RSU1Q15404 277 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 PAN3Q58A45 887 aaKnown RBP16.84■□□□□ 0.29
CHFR-217ENST00000540537 ASCL4Q6XD76 172 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 C11orf44Q8N8P7 122 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 CREB3L1Q96BA8 519 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 NR1H4Q96RI1 486 aaPredicted RBP16.84■□□□□ 0.29
CHFR-217ENST00000540537 PPIL3Q9H2H8 161 aaKnown RBP16.84■□□□□ 0.29
CHFR-217ENST00000540537 ZNF286AQ9HBT8 521 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 ZNF281Q9Y2X9 895 aa16.84■□□□□ 0.29
CHFR-217ENST00000540537 SIRT4Q9Y6E7 314 aaPredicted RBP16.84■□□□□ 0.29
CHFR-217ENST00000540537 A0A087X0M5 115 aa16.83■□□□□ 0.28
CHFR-217ENST00000540537 TRAV24A0A0B4J272 114 aa16.83■□□□□ 0.28
CHFR-217ENST00000540537 KBTBD11-OT1A0A1B0GTJ5 212 aa16.83■□□□□ 0.28
CHFR-217ENST00000540537 A0A1B0GX30 115 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms