RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LGI3Q8N145 548 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 TMEM178AQ8NBL3 297 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 POC1AQ8NBT0 407 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 OR10J5Q8NHC4 309 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ASB5Q8WWX0 329 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 C5orf66Q9H5L9 145 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 CNTD2Q9H8S5 307 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 A0A087WUJ7 227 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 MSTNO14793 375 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 BPNT1O95861 308 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 CRYABP02511 175 aaKnown RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 TK1P04183 234 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 NPSP0C0P6 89 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 DUSP1P28562 367 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 BLVRBP30043 206 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 MMP16P51512 607 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ARL6IP1Q15041 203 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ACOT6Q3I5F7 207 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 ZNF260Q3ZCT1 412 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ZNF100Q8IYN0 542 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 LRRC18Q8N456 261 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 TMEM52Q8NDY8 209 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 THAP3Q8WTV1 239 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 SLC25A43Q8WUT9 341 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 TBX15Q96SF7 602 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ADOQ96SZ5 270 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ZNF2Q9BSG1 426 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 VAMP8Q9BV40 100 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 KIAA1456Q9P272 454 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 RCL1Q9Y2P8 373 aaKnown RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 UBE2J1Q9Y385 318 aaPredicted RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 NKX2-2O95096 273 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 GABRR1P24046 479 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 SP6Q3SY56 376 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 TMEM268Q5VZI3 342 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 DNM1P46Q6ZS02 220 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 OR2Y1Q8NGV0 311 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 IL22RA2Q969J5 263 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ERGIC1Q969X5 290 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 TECTBQ96PL2 329 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 SPIN2AQ99865 258 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 SPIN2BQ9BPZ2 258 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 NICN1Q9BSH3 213 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 SH3BGRL3Q9H299 93 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 HS3ST3B1Q9Y662 390 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ZNF462Q96JM2 2506 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 TLN1Q9Y490 2541 aaKnown RBP7.62□□□□□ -1.19
DDB1-217ENST00000540166 IFITM10A6NMD0 228 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 MASP2O00187 686 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 DEDDO75618 318 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 ECI1P42126 302 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 ERVS71-1P61550 626 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 RPL18Q07020 188 aaKnown RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 TMEM183BQ1AE95 376 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 LCN15Q6UWW0 184 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 PAQR4Q8N4S7 273 aaPredicted RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 OR4C5Q8NGB2 326 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 NT5CQ8TCD5 201 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 SMIM7Q9BQ49 75 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 PLEKHJ1Q9NW61 149 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 TUBD1Q9UJT1 453 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 PRR32B1ATL7 298 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 AMBPP02760 352 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 GP1BBP13224 206 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 GNRHRP30968 328 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 ACAA2P42765 397 aaKnown RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 CSNK1A1P48729 337 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 PHLDA2Q53GA4 152 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 RHBDD2Q6NTF9 364 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 NUP54Q7Z3B4 507 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 OR2AJ1Q8NGZ0 328 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 AQP3Q92482 292 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 TSLPQ969D9 159 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 FAM71F1Q96KD3 344 aaPredicted RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 SLC5A6Q9Y289 635 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 SNRNP200O75643 2136 aaKnown RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 EYSQ5T1H1 3165 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 A8MVM7 634 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 DKK1O94907 266 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 MBPP02686 304 aaPredicted RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 TMEM225BP0DP42 221 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 TDGF1P3P51864 188 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 PSG6Q00889 435 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 IGFBP7Q16270 282 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 EMC4Q5J8M3 183 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 DCAF10Q5QP82 559 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 LINC01590Q5TEZ4 76 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 LEMD1Q68G75 181 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 DCXRQ7Z4W1 244 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 LINC00346Q8IVM7 164 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 CA13Q8N1Q1 262 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 ZNF843Q8N446 348 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 BCORP1Q8N888 145 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 MRPL24Q96A35 216 aaKnown RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 C8orf44Q96CB5 159 aa7.61□□□□□ -1.19
DDB1-217ENST00000540166 ZNF501Q96CX3 271 aaPredicted RBP7.61□□□□□ -1.19
DDB1-217ENST00000540166 ADGRG7Q96K78 797 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms