RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SDSLQ96GA7 329 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 GAFA1Q96PS6 74 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SOSTQ9BQB4 213 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PECRQ9BY49 303 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ZNF665Q9H7R5 613 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4Q9UBX2 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MRPS7Q9Y2R9 242 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 V9GYH0 126 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TMEM82A0PJX8 343 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNF737O75373 536 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 HLA-DQB1P01920 261 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PTHLHP12272 177 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SELLP14151 372 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 HIST1H1DP16402 221 aaKnown RBP15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 GNB3P16520 340 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ETV6P41212 452 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TAS2R20P59543 309 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 KCNJ8Q15842 424 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNF260Q3ZCT1 412 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CDNFQ49AH0 187 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 OLFML2AQ68BL7 652 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CLEC2AQ6UVW9 174 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 C17orf107Q6ZR85 190 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DNM1P46Q6ZS02 220 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 BPIFB2Q8N4F0 458 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FAM216BQ8N7L0 139 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNRF1Q8ND25 227 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 C10orf105Q8TEF2 133 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SULT4A1Q9BR01 284 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FAAP24Q9BTP7 215 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TMUB1Q9BVT8 246 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 BPESC1Q9GZL8 116 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SPACA1Q9HBV2 294 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PLEKHJ1Q9NW61 149 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ELF5Q9UKW6 265 aaPredicted RBP15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 HSF4Q9ULV5 492 aa15.77■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FABP12A6NFH5 140 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MFNGO00587 321 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CSF3P09919 207 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 LSAMPQ13449 338 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TMEM155Q4W5P6 130 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DCDC5Q6ZRR9 648 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MUC20Q8N307 709 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ASCC1Q8N9N2 400 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ABHD1Q96SE0 405 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DPCDQ9BVM2 203 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CHST6Q9GZX3 395 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SHARPINQ9H0F6 387 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DNTTIP1Q9H147 329 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PPA2Q9H2U2 334 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 AKIP1Q9NQ31 210 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CTSZQ9UBR2 303 aa15.76■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SETD2Q9BYW2 2564 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 A0A0G2JMP0 313 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 A0A0X1KG70 313 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 UBE2QL1A1L167 161 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CEACAM18A8MTB9 384 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 H3BUI4 141 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SIGLEC5O15389 551 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TMPRSS2O15393 492 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ADAM20O43506 726 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NDUFA2O43678 99 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MNDAP41218 407 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PAN3Q58A45 887 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SPANXN2Q5MJ10 180 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FAM131AQ6UXB0 335 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MFSD4AQ8N468 514 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNF561Q8N587 486 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 OR4S1Q8NGB4 309 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 OR4M2Q8NGB6 313 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ST8SIA4Q92187 359 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NARFLQ9H6Q4 476 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 AUNIPQ9H7T9 357 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 KAAG1Q9UBP8 84 aa15.75■□□□□ 0.11
TNFRSF1A-213ENST00000540022 IGHV4-30-2A0A087WSY4 118 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TMEM235A6NFC5 223 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NKX6-3A6NJ46 265 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MCRIP1C9JLW8 97 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NDUFS8O00217 210 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FCN3O75636 299 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 OR3A1P47881 315 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 IL13RA1P78552 427 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 IL18Q14116 193 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SLC36A1Q7Z2H8 476 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SNX29P2Q8IUI4 249 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NEK7Q8TDX7 302 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DYRK2Q92630 601 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 GCDHQ92947 438 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SNX22Q96L94 193 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PIMREGQ9BSJ6 248 aa15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.74■□□□□ 0.11
TNFRSF1A-213ENST00000540022 VWC2LB2RUY7 222 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 K7N7A8 449 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 GLAP06280 429 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 GSTP1P09211 210 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 INHBBP09529 407 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NR4A2P43354 598 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DSCR9P59020 149 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNF79Q15937 498 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CLEC12BQ2HXU8 276 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms