RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 HSMCR30P0CW71 290 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 EEF1B2P24534 225 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 ERP29P30040 261 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 SAA4P35542 130 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 GLIPR1P48060 266 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 BMXP51813 675 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 P2RX3P56373 397 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 ACTG1P63261 375 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 AESQ08117 197 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 GPR50Q13585 617 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 TPBGQ13641 420 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 MS4A15Q8N5U1 240 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 TMEM203Q969S6 136 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 MUL1Q969V5 352 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 COQ2Q96H96 371 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 METTL9Q9H1A3 318 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 IL36GQ9NZH8 169 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 LINC00312Q9Y6C7 94 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 hADV38S2A0JD32 116 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 MEIOCA2RUB1 952 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 HSPB6O14558 160 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 IGHV4-59P01825 116 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 COX7A1P24310 79 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 MAPK3P27361 379 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 RPS25P62851 125 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 IL13RA2Q14627 380 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 JAGN1Q8N5M9 183 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 CHST4Q8NCG5 386 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 OR4D6Q8NGJ1 314 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 PPP1R35Q8TAP8 253 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 UFD1Q92890 307 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 SLC25A28Q96A46 364 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 ZNF714Q96N38 554 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 ISYNA1Q9NPH2 558 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 ING3Q9NXR8 418 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 SF3B6Q9Y3B4 125 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 STAB1Q9NY15 2570 aa14.91□□□□□ -0.02
SNRPA1-203ENST00000540017 TMEM89A2RUT3 159 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 MMP23AO75900 390 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 CSN2P05814 226 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 SERPINA2P20848 420 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 RBM11P57052 281 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 MLLT11Q13015 90 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 ATXN7L3Q14CW9 347 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 SLC22A6Q4U2R8 563 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 TMEM91Q6ZNR0 172 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 CEACAM19Q7Z692 300 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 LRRTM1Q86UE6 522 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 LDLRAD3Q86YD5 345 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 OSR2Q8N2R0 312 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 THRSPQ92748 146 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 MGLLQ99685 303 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 CHIAQ9BZP6 476 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 HEXA-AS1Q9H8Q6 139 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 ZMAT3Q9HA38 289 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 BLOC1S6Q9UL45 172 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 ST3GAL6Q9Y274 331 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 MRPS28Q9Y2Q9 187 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 FAM96BQ9Y3D0 163 aa14.9□□□□□ -0.02
SNRPA1-203ENST00000540017 hCG_1809904A0A1W2PP81 198 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 A0A1W2PPE2 198 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 A0A1W2PR64 198 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 A0A1W2PRV1 198 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 CSTBP04080 98 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 IGHV1-8P0DP01 117 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 CPEP16870 476 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 PAX6P26367 422 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 IER3P46695 156 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 TBCEQ15813 527 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 NHLRC3Q5JS37 347 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 C16orf87Q6PH81 154 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 GLIPR1L1Q6UWM5 242 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 CDH26Q8IXH8 852 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 GCDHQ92947 438 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 S100A13Q99584 98 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 ACOT13Q9NPJ3 140 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 ZNRD1Q9P1U0 126 aa14.89□□□□□ -0.03
SNRPA1-203ENST00000540017 ODAMA1E959 279 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 GEMIN2O14893 280 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 RBP4P02753 201 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 FBP1P09467 338 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 UCHL1P09936 223 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 EMX1Q04741 257 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 MIDNQ504T8 468 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 PAN3Q58A45 887 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 KRBOX4Q5JUW0 171 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 BAIAP2L2Q6UXY1 529 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 TRAPPC6BQ86SZ2 158 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 PLPPR1Q8TBJ4 325 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 SSMEM1Q8WWF3 244 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 CORO2AQ92828 525 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 Q9H521 79 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 UBE2J1Q9Y385 318 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 POMT1Q9Y6A1 747 aa14.88□□□□□ -0.03
SNRPA1-203ENST00000540017 HKR1P10072 659 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 SRMP19623 302 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 GDNFP39905 211 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 GABARAPL2P60520 117 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 SSX1Q16384 188 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 TAF9Q16594 264 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms