RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PRAMEF5Q5TYX0 476 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 PRAMEF6Q5VXH4 476 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 OR2M3Q8NG83 312 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 OR10P1Q8NGE3 313 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 CT55Q8WUE5 264 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 TMEM9BQ9NQ34 198 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 ERRFI1Q9UJM3 462 aaPredicted RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 KLK13Q9UKR3 277 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 TNFSF18Q9UNG2 199 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 A0A1W2PPE2 198 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 CLEC18AA5D8T8 446 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 DVL1O14640 695 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 ABCD4O14678 606 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 NPIPB7O75200 414 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 CCL3P10147 92 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 NCR3LG1Q68D85 454 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 CLEC18CQ8NCF0 446 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 OR6S1Q8NH40 331 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 PIK3IP1Q96FE7 263 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 ZPBPQ9BS86 351 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 DEFB127Q9H1M4 99 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 HIPK2Q9H2X6 1198 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 MPPED1O15442 326 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 METTL15P1P0C7V9 234 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 RAB4AP20338 218 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 TMEM267Q0VDI3 215 aaPredicted RBP8.75□□□□□ -1.01
TRAF1-202ENST00000540010 DEFB108BQ8NET1 73 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 OR13D1Q8NGV5 346 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 OR1F12Q8NHA8 337 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 LOXL4Q96JB6 756 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 HDHD3Q9BSH5 251 aaPredicted RBP8.75□□□□□ -1.01
TRAF1-202ENST00000540010 LIPT2A6NK58 231 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 H0Y8G0 127 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 AQP7O14520 342 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 UPK3AO75631 287 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 FGF8P55075 233 aaPredicted RBP8.75□□□□□ -1.01
TRAF1-202ENST00000540010 SPEM2Q0P670 501 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF816Q0VGE8 651 aaPredicted RBP8.75□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF66Q6ZN08 573 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF610Q8N9Z0 462 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 TXN2Q99757 166 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 ANXA10Q9UJ72 324 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 LIPGQ9Y5X9 500 aa8.75□□□□□ -1.01
TRAF1-202ENST00000540010 LOC102723996A0A087X1L8 192 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 C1QL1O75973 258 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 SLC25A4P12235 298 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 FABP6P51161 128 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 FUT6P51993 359 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 RGS7BPQ6MZT1 257 aaPredicted RBP8.74□□□□□ -1.01
TRAF1-202ENST00000540010 LYZL2Q7Z4W2 148 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 TLNRD1Q9H1K6 362 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 MIOXQ9UGB7 285 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 UBE2L5PA0A1B0GUS4 154 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF320A2RRD8 509 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 NTF3P20783 257 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ENDOGQ14249 297 aaKnown RBP8.74□□□□□ -1.01
TRAF1-202ENST00000540010 SKA3Q8IX90 412 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ZDHHC23Q8IYP9 409 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 FAM185AQ8N0U4 392 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 RFESDQ8TAC1 157 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 RPS4Y2Q8TD47 263 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 C22orf15Q8WYQ4 148 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 DYRK2Q92630 601 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 SPSB1Q96BD6 273 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ADGRG7Q96K78 797 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 IMMP1LQ96LU5 166 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 NAA60Q9H7X0 242 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 TMED3Q9Y3Q3 217 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 MS4A18H0YCH9 400 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 CBR3O75828 277 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 LY86O95711 162 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 MT-CO3P00414 261 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ZP1P60852 638 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 MS4A18Q3C1V0 323 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 JMJD6Q6NYC1 403 aaPredicted RBP8.74□□□□□ -1.01
TRAF1-202ENST00000540010 CXorf67Q86X51 503 aaPredicted RBP8.74□□□□□ -1.01
TRAF1-202ENST00000540010 SLC26A10Q8NG04 563 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF519Q8TB69 540 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 ERGIC1Q969X5 290 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 P4HTMQ9NXG6 502 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 OR5AC2Q9NZP5 309 aa8.74□□□□□ -1.01
TRAF1-202ENST00000540010 PMS2P1A4D2B8 440 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 SPINT2O43291 252 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 MMP16P51512 607 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 H3F3AP84243 136 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF90Q03938 601 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 NHLRC3Q5JS37 347 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 ASB10Q8WXI3 467 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 MSI2Q96DH6 328 aaKnown RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 PECRQ9BY49 303 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 RYDENQ9NUL5 291 aaKnown RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 CHCHD2Q9Y6H1 151 aaPredicted RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 SHANK1Q9Y566 2161 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 HSBP1L1C9JCN9 74 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 SSPNQ14714 243 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
TRAF1-202ENST00000540010 RALGAPA1Q6GYQ0 2036 aa8.73□□□□□ -1.01
TRAF1-202ENST00000540010 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms