RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ZCCHC14Q8WYQ9 949 aaKnown RBP19.03■□□□□ 0.64
HOMER3-204ENST00000539827 RND1Q92730 232 aa19.03■□□□□ 0.64
HOMER3-204ENST00000539827 RHOFQ9HBH0 211 aa19.03■□□□□ 0.64
HOMER3-204ENST00000539827 SPACA1Q9HBV2 294 aa19.03■□□□□ 0.64
HOMER3-204ENST00000539827 UFSP2Q9NUQ7 469 aa19.03■□□□□ 0.64
HOMER3-204ENST00000539827 HSPB11Q9Y547 144 aa19.03■□□□□ 0.64
HOMER3-204ENST00000539827 A6NLC8 198 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 TPD52L2O43399 206 aaKnown RBP19.02■□□□□ 0.64
HOMER3-204ENST00000539827 GLRXP35754 106 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 RAP2BP61225 183 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 NKX6-1P78426 367 aaPredicted RBP19.02■□□□□ 0.64
HOMER3-204ENST00000539827 MPPED2Q15777 294 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 ZNF660Q6AZW8 331 aaPredicted RBP19.02■□□□□ 0.64
HOMER3-204ENST00000539827 WFDC8Q8IUA0 241 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 Q8IYB0 196 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 TMEM185AQ8NFB2 350 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 SYT3Q9BQG1 590 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 DPCDQ9BVM2 203 aaPredicted RBP19.02■□□□□ 0.64
HOMER3-204ENST00000539827 SIRPB1O00241 398 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 NAPSAO96009 420 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 HOXA4Q00056 320 aaPredicted RBP19.02■□□□□ 0.64
HOMER3-204ENST00000539827 UNQ6494/PRO21346Q6UXR6 183 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 DMRTA2Q96SC8 542 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 Q9N2K0 584 aa19.02■□□□□ 0.64
HOMER3-204ENST00000539827 CHD8Q9HCK8 2581 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 ZNF250P15622 560 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 CD40P25942 277 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 DHODHQ02127 395 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 SLC7A5P1Q8MH63 180 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 SPERTQ8NA61 448 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 POC1AQ8NBT0 407 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 LILRB4Q8NHJ6 448 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 VKORC1Q9BQB6 163 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 SLC23A1Q9UHI7 598 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 CCSO14618 274 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 WNT9BO14905 357 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 RBMXP38159 391 aaKnown RBP19.01■□□□□ 0.63
HOMER3-204ENST00000539827 TMEM128Q5BJH2 165 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 LY6G6FQ5SQ64 297 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 DHRS11Q6UWP2 260 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 KCTD9Q7L273 389 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 OR2Z1Q8NG97 314 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 MITD1Q8WV92 249 aa19.01■□□□□ 0.63
HOMER3-204ENST00000539827 OR2H2O95918 312 aa19■□□□□ 0.63
HOMER3-204ENST00000539827 FCGR2CP31995 323 aa19■□□□□ 0.63
HOMER3-204ENST00000539827 SLC9A3R2Q15599 337 aa19■□□□□ 0.63
HOMER3-204ENST00000539827 IGSF11Q5DX21 431 aa19■□□□□ 0.63
HOMER3-204ENST00000539827 PHB2Q99623 299 aa19■□□□□ 0.63
HOMER3-204ENST00000539827 C14orf166Q9Y224 244 aaKnown RBP19■□□□□ 0.63
HOMER3-204ENST00000539827 MEMO1Q9Y316 297 aa19■□□□□ 0.63
HOMER3-204ENST00000539827 SFT2D2O95562 160 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 IGHV3-13P01766 116 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 FXYD4P59646 89 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 SURF2Q15527 256 aaPredicted RBP18.99■□□□□ 0.63
HOMER3-204ENST00000539827 MRPL30Q8TCC3 161 aaKnown RBP18.99■□□□□ 0.63
HOMER3-204ENST00000539827 TMEM171Q8WVE6 324 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 TOMM40LQ969M1 308 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 FXYD6Q9H0Q3 95 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 IFT22Q9H7X7 185 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 PRR13Q9NZ81 148 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 OR14J1Q9UGF5 321 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 OPN4Q9UHM6 478 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 KNG1P01042 644 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 SCTP09683 121 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 CEBPDP49716 269 aaPredicted RBP18.99■□□□□ 0.63
HOMER3-204ENST00000539827 KLF3P57682 345 aaPredicted RBP18.99■□□□□ 0.63
HOMER3-204ENST00000539827 RBM39Q14498 530 aaKnown RBP18.99■□□□□ 0.63
HOMER3-204ENST00000539827 PAN3Q58A45 887 aaKnown RBP18.99■□□□□ 0.63
HOMER3-204ENST00000539827 WDR82Q6UXN9 313 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 C20orf204Q6ZNR8 217 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 TLNRD1Q9H1K6 362 aa18.99■□□□□ 0.63
HOMER3-204ENST00000539827 CADP27708 2225 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 A0A1B0GWJ7 208 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 ZSCAN5BA6NJL1 495 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 NOS1APO75052 506 aaPredicted RBP18.98■□□□□ 0.63
HOMER3-204ENST00000539827 DUS4LO95620 317 aaKnown RBP18.98■□□□□ 0.63
HOMER3-204ENST00000539827 GLAP06280 429 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 THBDP07204 575 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 ACAA1P09110 424 aaPredicted RBP18.98■□□□□ 0.63
HOMER3-204ENST00000539827 NFYAP23511 347 aaPredicted RBP18.98■□□□□ 0.63
HOMER3-204ENST00000539827 ECI1P42126 302 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 SUPT4H1P63272 117 aaKnown RBP18.98■□□□□ 0.63
HOMER3-204ENST00000539827 CLEC18BQ6UXF7 455 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 OR5M8Q8NGP6 311 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 TMEM165Q9HC07 324 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 HES4Q9HCC6 221 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 C1orf123Q9NWV4 160 aa18.98■□□□□ 0.63
HOMER3-204ENST00000539827 hCG_1807616A0A1W2PRN6 198 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 SLC33A1O00400 549 aaPredicted RBP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 SH2D1BO14796 132 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 PPP3CBP16298 524 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 GLP1RP43220 463 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 CASP6P55212 293 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 ZNF146Q15072 292 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 C1QTNF12Q5T7M4 302 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 Q6ZS49 121 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 USB1Q9BQ65 265 aaKnown RBP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 TLN1Q9Y490 2541 aaKnown RBP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 CTSDP07339 412 aaPredicted RBP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 ZNF728P0DKX0 622 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms