RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DIRC2Q96SL1 478 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 SLC6A1P30531 599 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR3A1P47881 315 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 ZP4Q12836 540 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 C16orf47Q6ZP98 133 aaPredicted RBP5.72□□□□□ -1.49
LSAMP-207ENST00000539563 RASL11BQ9BPW5 248 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 WSB1Q9Y6I7 421 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 C3orf80F5H4A9 247 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 CYR61O00622 381 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 KIR2DL1P43626 348 aaPredicted RBP5.72□□□□□ -1.49
LSAMP-207ENST00000539563 HIST1H3AP68431 136 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 PDPNQ86YL7 162 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR10G4Q8NGN3 311 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR10G9Q8NGN4 311 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR10G7Q8NGN6 311 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 MRGPRDQ8TDS7 321 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 TOLLIPQ9H0E2 274 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 PLAC1Q9HBJ0 212 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 SLC52A3Q9NQ40 469 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR1A1Q9P1Q5 309 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 PRSS23O95084 383 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 MESTQ5EB52 335 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 C8orf82Q6P1X6 216 aaPredicted RBP5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR8D4Q8NGM9 314 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 HSD17B10Q99714 261 aaKnown RBP5.72□□□□□ -1.49
LSAMP-207ENST00000539563 RP1P56715 2156 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 TEX50A0A1B0GTY4 177 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 DEFB108AA8MXU0 73 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 YBX1P67809 324 aaKnown RBP5.72□□□□□ -1.49
LSAMP-207ENST00000539563 INPP5JQ15735 1006 aaPredicted RBP5.72□□□□□ -1.49
LSAMP-207ENST00000539563 GABRA6Q16445 453 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 OR4A4PQ8NGN8 299 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 PERPQ96FX8 193 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 CFHR5Q9BXR6 569 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 PLSCR3Q9NRY6 295 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 ANXA10Q9UJ72 324 aa5.72□□□□□ -1.49
LSAMP-207ENST00000539563 F5P12259 2224 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 CLDN34H7C241 214 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 GATCO43716 136 aaKnown RBP5.71□□□□□ -1.49
LSAMP-207ENST00000539563 CA11O75493 328 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 HOXD4P09016 255 aaPredicted RBP5.71□□□□□ -1.49
LSAMP-207ENST00000539563 LIFP15018 202 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 HLA-GP17693 338 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 BCL3P20749 454 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 TIAL1Q01085 375 aaKnown RBP eCLIP5.71□□□□□ -1.49
LSAMP-207ENST00000539563 B3GNTL1Q67FW5 361 aaPredicted RBP5.71□□□□□ -1.49
LSAMP-207ENST00000539563 ZNF66Q6ZN08 573 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 SLC25A42Q86VD7 318 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 ASB5Q8WWX0 329 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 DPF1Q92782 380 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 ABHD1Q96SE0 405 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 CD160O95971 181 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 CCL2P13500 99 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 IL9P15248 144 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 INSL4Q14641 139 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 GMPPAQ96IJ6 420 aaPredicted RBP5.71□□□□□ -1.49
LSAMP-207ENST00000539563 SAP30LQ9HAJ7 183 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 NTMQ9P121 344 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 NPTNQ9Y639 398 aa5.71□□□□□ -1.49
LSAMP-207ENST00000539563 A0A1W2PR80 420 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 OR2T8A6NH00 312 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 OR4A8P0C604 315 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 HLA-DRB3P79483 266 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 CLEC12BQ2HXU8 276 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 CDX2Q99626 313 aaPredicted RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 TCRBV16S1A1N1A0A5B0 115 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 MAP1LC3B2A6NCE7 125 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 B4DEV8 164 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 OR1B1Q8NGR6 318 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 C12orf57Q99622 126 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 MAP1LC3BQ9GZQ8 125 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 MS4A5Q9H3V2 200 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 TECRQ9NZ01 308 aaKnown RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 RNF7Q9UBF6 113 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 INSIG2Q9Y5U4 225 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 SCN10AQ9Y5Y9 1956 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 C1QAP02745 245 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 MAGEA5P43359 124 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 MRPS11P82912 194 aaKnown RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 COX19Q49B96 90 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 SFTPA1Q8IWL2 248 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 RFESDQ8TAC1 157 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 R3HDM4Q96D70 268 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 NARFLQ9H6Q4 476 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 CCL27Q9Y4X3 112 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 GREB1LQ9C091 1923 aaPredicted RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF716A6NP11 495 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 B4E171 279 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 TSPAN7P41732 249 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 GGTLC2Q14390 218 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 CD226Q15762 336 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 GVQW1Q8N7I0 195 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 PRSS3P2Q8NHM4 247 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 BLNKQ8WV28 456 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 GPR35Q9HC97 309 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 GPR27Q9NS67 375 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 LYRM2Q9NU23 88 aaPredicted RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 MRPS18AQ9NVS2 196 aaKnown RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 FBXL17Q9UF56 701 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms