RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 C3orf85A0A1B0GTC6 90 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 TOX3O15405 576 aaPredicted RBP17.53■□□□□ 0.4
TMEM260-203ENST00000539559 OR7C1O76099 320 aaPredicted RBP17.53■□□□□ 0.4
TMEM260-203ENST00000539559 ZIC4Q8N9L1 334 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 MAFAQ8NHW3 353 aaPredicted RBP17.53■□□□□ 0.4
TMEM260-203ENST00000539559 HS3ST3B1Q9Y662 390 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 PROB1E7EW31 1015 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 HSD17B6O14756 317 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 TMEM50AO95807 157 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 B4GALT1P15291 398 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 NKX2-1P43699 371 aaPredicted RBP17.52■□□□□ 0.4
TMEM260-203ENST00000539559 DLK1P80370 383 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 ZXDAP98168 799 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 HIST2H3AQ71DI3 136 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 SAP25Q8TEE9 199 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 ALKBH3Q96Q83 286 aaPredicted RBP17.52■□□□□ 0.4
TMEM260-203ENST00000539559 SYT3Q9BQG1 590 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 DMDP11532 3685 aa17.52■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF407Q9C0G0 2248 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 HSPB6O14558 160 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 LAMTOR5O43504 91 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 NRASP01111 189 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 PPYP01298 95 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 CCL3P10147 92 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 HOXA5P20719 270 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 NPBWR2P48146 333 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 RAB1AP62820 205 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 HLA-BQ31612 363 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 RABEPKQ7Z6M1 372 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 OR14L1PQ8NHC6 308 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 PIGCQ92535 297 aa17.52■□□□□ 0.39
TMEM260-203ENST00000539559 FRYQ5TBA9 3013 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 MPPED1O15442 326 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 ADAM20O43506 726 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 SRP19P09132 144 aaKnown RBP17.51■□□□□ 0.39
TMEM260-203ENST00000539559 TDGF1P13385 188 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 DYNLT3P51808 116 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 HIST1H3AP68431 136 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 ELOBQ15370 118 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 HIST2H3PS2Q5TEC6 136 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 GUSBP11Q6P575 273 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 CALHM1Q8IU99 346 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 ODF3L1Q8IXM7 274 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 SPSB1Q96BD6 273 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 PFDN5Q99471 154 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 ANGPTL4Q9BY76 406 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 SRXN1Q9BYN0 137 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 SLC7A10Q9NS82 523 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 UBE2J1Q9Y385 318 aaPredicted RBP17.51■□□□□ 0.39
TMEM260-203ENST00000539559 HIKESHIQ53FT3 197 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 TBC1D26Q86UD7 250 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 TMEM252Q8N6L7 170 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF383Q8NA42 475 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 FGFBP3Q8TAT2 258 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 CRLF2Q9HC73 371 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 FSCN3Q9NQT6 498 aa17.51■□□□□ 0.39
TMEM260-203ENST00000539559 A0A0J9YW62 118 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 DKK1O94907 266 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 CRYGSP22914 178 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 GNRHRP30968 328 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF429Q86V71 674 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 MAML2Q8IZL2 1156 aaPredicted RBP17.5■□□□□ 0.39
TMEM260-203ENST00000539559 C17orf78Q8N4C9 275 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 LFNGQ8NES3 379 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 BCO1Q9HAY6 547 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 TMED3Q9Y3Q3 217 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 TRDCB7Z8K6 153 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 C3orf80F5H4A9 247 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 H3BP45 60 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF92Q03936 586 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF154Q13106 437 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 EIF3IQ13347 325 aaKnown RBP17.5■□□□□ 0.39
TMEM260-203ENST00000539559 ICAM4Q14773 271 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF695Q8IW36 515 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 C11orf1Q9H5F2 150 aa17.5■□□□□ 0.39
TMEM260-203ENST00000539559 LOC102725191A0A1B0GVB3 256 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 CYB5BO43169 146 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF32P17041 273 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 DAZAP2Q15038 168 aaPredicted RBP17.49■□□□□ 0.39
TMEM260-203ENST00000539559 OR10D4PQ8NGN7 298 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 RHOVQ96L33 236 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 HS3ST6Q96QI5 342 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 FOXD3Q9UJU5 478 aaPredicted RBP17.49■□□□□ 0.39
TMEM260-203ENST00000539559 TERTO14746 1132 aaKnown RBP17.49■□□□□ 0.39
TMEM260-203ENST00000539559 SYNGR3O43761 229 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 TRGC2P03986 189 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 CFIP05156 583 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 MALLQ13021 153 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 CNN3Q15417 329 aaKnown RBP17.49■□□□□ 0.39
TMEM260-203ENST00000539559 PLCXD3Q63HM9 321 aa17.49■□□□□ 0.39
TMEM260-203ENST00000539559 KLK3P07288 261 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-203ENST00000539559 CDX1P47902 265 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-203ENST00000539559 Q6ZSR3 168 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 C1QL4Q86Z23 238 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 LY6G6EA0A0G2JKS1 128 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 ZNF587BE7ETH6 402 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 ZIC3O60481 467 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 TCN2P20062 427 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 MAS1LP35410 378 aa17.48■□□□□ 0.39
TMEM260-203ENST00000539559 VAMP2P63027 116 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms