RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF44P15621 663 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 IGLL1P15814 213 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 CD33P20138 364 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 PTGFRP43088 359 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 RASSF2P50749 326 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 ARHGDIBP52566 201 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 ABCA11PQ4W5N1 156 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 VAX1Q5SQQ9 334 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 SLC25A30Q5SVS4 291 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 TPTE2P1Q5T6R2 138 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 Q6P435 159 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 SAXO1Q8IYX7 474 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 OR13C3Q8NGS6 347 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 CAPSLQ8WWF8 208 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 PELI1Q96FA3 418 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 RBM14Q96PK6 669 aaKnown RBP9.98□□□□□ -0.81
VAMP1-206ENST00000538970 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
VAMP1-206ENST00000538970 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.98□□□□□ -0.81
VAMP1-206ENST00000538970 TSSC4Q9Y5U2 329 aaPredicted RBP9.98□□□□□ -0.81
VAMP1-206ENST00000538970 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 SH2D7A6NKC9 451 aaPredicted RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 LY6LH3BQJ8 138 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 BUB1B-PAK6H3BSN5 160 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 SLC33A1O00400 549 aaPredicted RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 AMY1AP04745 511 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 AMY2AP04746 511 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 ALPLP05186 524 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 CEACAM3P40198 252 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 SNRPGP62308 76 aaKnown RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 KPNB1Q14974 876 aaKnown RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 ATXN7L3Q14CW9 347 aaPredicted RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 C17orf58Q2M2W7 97 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 KRBOX4Q5JUW0 171 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 UTF1Q5T230 341 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 MEDAGQ5VYS4 303 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 CCDC121Q6ZUS5 278 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 CENPVQ7Z7K6 275 aaPredicted RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 OR4X2Q8NGF9 303 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 STMN2Q93045 179 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 MYDGFQ969H8 173 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 HRASLS5Q96KN8 279 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 C4orf36Q96KX1 117 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 PPIL3Q9H2H8 161 aaKnown RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 NEK6Q9HC98 313 aa9.97□□□□□ -0.81
VAMP1-206ENST00000538970 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
VAMP1-206ENST00000538970 ZNF729A6NN14 1252 aaPredicted RBP9.96□□□□□ -0.82
VAMP1-206ENST00000538970 E9PQ18 207 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 J3QLW9 94 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 DYNC1I1O14576 645 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 TOR1AO14656 332 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 PF4P02776 101 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 ZNF19P17023 458 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 ZP1P60852 638 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 SLC35A2P78381 396 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 SCN1BQ07699 218 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 ALKBH1Q13686 389 aaKnown RBP9.96□□□□□ -0.82
VAMP1-206ENST00000538970 CDK5R1Q15078 307 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 CCDC144NLQ6NUI1 221 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 C11orf87Q6NUJ2 197 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 C10orf99Q6UWK7 81 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 ACBD7Q8N6N7 88 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 OR4D6Q8NGJ1 314 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 LGALS12Q96DT0 336 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 KIRREL1Q96J84 757 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 KRTAP17-1Q9BYP8 105 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 ZCCHC4Q9H5U6 513 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 ING3Q9NXR8 418 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 EXOGQ9Y2C4 368 aaKnown RBP9.96□□□□□ -0.82
VAMP1-206ENST00000538970 MYRFQ9Y2G1 1151 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 COL7A1Q02388 2944 aa9.96□□□□□ -0.82
VAMP1-206ENST00000538970 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 M0QZK8 103 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 EI24O14681 340 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 SULT1B1O43704 296 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 ATP5HO75947 161 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 MPIG6BO95866 241 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 HCKP08631 526 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 TMEM225BP0DP42 221 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 MNDAP41218 407 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 OR3A4PP47883 348 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 PRRX1P54821 245 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 RBM39Q14498 530 aaKnown RBP9.95□□□□□ -0.82
VAMP1-206ENST00000538970 KISS1Q15726 138 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 OR51T1Q8NGJ9 327 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 PYDC1Q8WXC3 89 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 RCC1LQ96I51 464 aaKnown RBP9.95□□□□□ -0.82
VAMP1-206ENST00000538970 ALG8Q9BVK2 526 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 OR6C3Q9NZP0 311 aa9.95□□□□□ -0.82
VAMP1-206ENST00000538970 KBTBD11-OT1A0A1B0GTJ5 212 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 SNTNA6NMZ2 147 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 K7EIL1 84 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 HSPB6O14558 160 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 DEGS1O15121 323 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 CIB2O75838 187 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 ZFPL1O95159 310 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 CGB3P0DN86 165 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms