RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 UBE2NP61088 152 aaKnown RBP7.49□□□□□ -1.21
UBE3B-208ENST00000538070 HIST1H3AP68431 136 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 OR2B11Q5JQS5 317 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 HIST2H3PS2Q5TEC6 136 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 HIST2H3AQ71DI3 136 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 MDP1Q86V88 176 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 CCDC36Q8IYA8 594 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ERGIC1Q969X5 290 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ZPBPQ9BS86 351 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 NMES1Q9C002 83 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 MYOZ1Q9NP98 299 aaPredicted RBP7.49□□□□□ -1.21
UBE3B-208ENST00000538070 RCL1Q9Y2P8 373 aaKnown RBP7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF175Q9Y473 711 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 WRBO00258 174 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 CST7O76096 145 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 TK1P04183 234 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 HOXD4P09016 255 aaPredicted RBP7.49□□□□□ -1.21
UBE3B-208ENST00000538070 MMP7P09237 267 aaPredicted RBP7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF708P17019 499 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 CEBPDP49716 269 aaPredicted RBP7.49□□□□□ -1.21
UBE3B-208ENST00000538070 NHLH2Q02577 135 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 LHFPL1Q86WI0 220 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 C20orf24Q9BUV8 137 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 TM2D1Q9BX74 207 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 FAM86C1Q9NVL1 165 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 MED12LQ86YW9 2145 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 PLCE1Q9P212 2302 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ABCD4O14678 606 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ACTL6AO96019 429 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 CYC1P08574 325 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 FGF2P09038 288 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 PPT1P50897 306 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 AKR1D1P51857 326 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 SLC25A24Q6NUK1 477 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 CBLN2Q8IUK8 224 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 SSC4DQ8WTU2 575 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 ARL11Q969Q4 196 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 FER1L6-AS2Q96M78 137 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 PRRX2Q99811 253 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 SYT3Q9BQG1 590 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 NAA60Q9H7X0 242 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 CCL28Q9NRJ3 127 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 MTCH1Q9NZJ7 389 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 RNF150Q9ULK6 438 aa7.49□□□□□ -1.21
UBE3B-208ENST00000538070 SSSCA1O60232 199 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 FABP6P51161 128 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 POLR2GP62487 172 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 GAPTQ8N292 157 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 POC1AQ8NBT0 407 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 SLC30A7Q8NEW0 376 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 CNTNAP3BQ96NU0 1288 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 TP53RKQ96S44 253 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 CNTNAP3Q9BZ76 1288 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 OR2J1Q9GZK6 312 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 OBP2BQ9NPH6 170 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 PPP1R3CQ9UQK1 317 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 KLF13Q9Y2Y9 288 aaPredicted RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 DOCK11Q5JSL3 2073 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 NKX2-6A6NCS4 301 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 FAM24AA6NFZ4 105 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 A8MXK9 166 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 DNPH1O43598 174 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 EIF3GO75821 320 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 PPYP01298 95 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 IGLV3-1P01715 115 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 MBPP02686 304 aaPredicted RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 CTSDP07339 412 aaPredicted RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 RPS16P62249 146 aaKnown RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 H3F3CQ6NXT2 135 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 Q6ZRG5 221 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 SLC35G3Q8N808 338 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 STOML3Q8TAV4 291 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 HPSE2Q8WWQ2 592 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 APOBEC3DQ96AK3 386 aaPredicted RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 CDH20Q9HBT6 801 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 AUP1Q9Y679 476 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 ATP6V1G2-DDX39BF2Z307 99 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 CDIPTO14735 213 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 IGHV3-13P01766 116 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 IGHV3-7P01780 117 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 RPS2P15880 293 aaKnown RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF345Q14585 488 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 RIPPLY2Q5TAB7 128 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 PEAR1Q5VY43 1037 aaPredicted RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 VHLLQ6RSH7 139 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 TFAP2EQ6VUC0 442 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 FOXL2NBQ6ZUU3 175 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 WBP1Q96G27 269 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 DDA1Q9BW61 102 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 GPR87Q9BY21 358 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 PCDHB16Q9NRJ7 776 aa7.48□□□□□ -1.21
UBE3B-208ENST00000538070 INTS1Q8N201 2190 aaKnown RBP7.48□□□□□ -1.21
UBE3B-208ENST00000538070 ANKRD11Q6UB99 2663 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 ARPC4-TTLL3A0A0A6YYG9 625 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 HKR1P10072 659 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms