RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 VAMP2P63027 116 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
CPSF7-218ENST00000537641 SLC35E3Q7Z769 313 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 DPPA2Q7Z7J5 298 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 C20orf196Q8IYI0 205 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 CLEC18CQ8NCF0 446 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 OR10G4Q8NGN3 311 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 AKR7LQ8NHP1 331 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 TP53RKQ96S44 253 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 RBM24Q9BX46 236 aaKnown RBP10.51□□□□□ -0.73
CPSF7-218ENST00000537641 DEFB126Q9BYW3 111 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 BCL2L14Q9BZR8 327 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 GAR1Q9NY12 217 aaKnown RBP10.51□□□□□ -0.73
CPSF7-218ENST00000537641 DKKL1Q9UK85 242 aa10.51□□□□□ -0.73
CPSF7-218ENST00000537641 NCOA6Q14686 2063 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-218ENST00000537641 NKX2-6A6NCS4 301 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF724A8MTY0 619 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 B4DEV8 164 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 RPL36A-HNRNPH2H7BZ11 118 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 GEMIN2O14893 280 aaKnown RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 GPR37O15354 613 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 SYNGR3O43761 229 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 CST2P09228 141 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FUT6P51993 359 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 CD81P60033 236 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ICAM4Q14773 271 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ELOBQ15370 118 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 OR8G1Q15617 311 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 KRTAP27-1Q3LI81 207 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 MEX3BQ6ZN04 569 aaKnown RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF600Q6ZNG1 722 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 GPR137CQ8N3F9 429 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 TMEM252Q8N6L7 170 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF385AQ96PM9 386 aaKnown RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 DOK5Q9P104 306 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 SLC7A11Q9UPY5 501 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 CHCHD2Q9Y6H1 151 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 IGKV1-12A0A0C4DH73 117 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 A0A1B0GV50 99 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A10PA6NDY2 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A18PA6NE21 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A16PA6NEW6 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A20PA6NIJ5 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A8PA6NJQ4 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A7PA6NKC0 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A22PA8MWA6 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A12PA8MX19 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A5PA8MXJ8 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A23PA8MXZ1 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 NRASP01111 189 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 IGKV1D-12P01611 117 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A15PP0C7V4 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A13PP0C7W8 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A14PP0C7W9 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FAM90A24PP0C7X0 464 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 FGF5P12034 268 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 TCN2P20062 427 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 NDUFA6P56556 154 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 CCL20P78556 96 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 TLE4Q04727 773 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 PIGYQ3MUY2 71 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 PYY3Q5JQD4 70 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF429Q86V71 674 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF695Q8IW36 515 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 SELENOHQ8IZQ5 122 aaKnown RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZFP62Q8NB50 900 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-218ENST00000537641 OR2AE1Q8NHA4 323 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 OR1F12Q8NHA8 337 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 Q8WTZ3 238 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 DYRK2Q92630 601 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 NIPSNAP3BQ9BS92 247 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF700Q9H0M5 742 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 WDR54Q9H977 334 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 ST3GAL6Q9Y274 331 aa10.5□□□□□ -0.73
CPSF7-218ENST00000537641 TRBV23-1A0A0A0MS06 115 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 MED19A0JLT2 244 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-218ENST00000537641 IFITM10A6NMD0 228 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 CDRT15L2A8MXV6 281 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 DNPH1O43598 174 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 YIF1AO95070 293 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 ITGA3P26006 1051 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 GLIPR1P48060 266 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 RGS19P49795 217 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 RBM11P57052 281 aaKnown RBP10.49□□□□□ -0.73
CPSF7-218ENST00000537641 DLK1P80370 383 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 IL24Q13007 206 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 IL11RAQ14626 422 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 AKR1C8PQ5T2L2 129 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 IFI44Q8TCB0 444 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 TMEM171Q8WVE6 324 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 IL22RA2Q969J5 263 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 SLAMF9Q96A28 289 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 SF3B5Q9BWJ5 86 aaKnown RBP10.49□□□□□ -0.73
CPSF7-218ENST00000537641 FSCN3Q9NQT6 498 aa10.49□□□□□ -0.73
CPSF7-218ENST00000537641 UBE2J1Q9Y385 318 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms