RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PTCRAQ6ISU1 281 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 VASH2Q86V25 355 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 BAGE3Q86Y29 109 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 BAGE2Q86Y30 109 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 R3HDMLQ9H3Y0 253 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 LRRC3CA6NJW4 275 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 TMEM14DPA8MWL7 114 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 J3QR06 171 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 BNIP3LO60238 219 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF253O75346 499 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 VENTXO95231 258 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 PRRX1P54821 245 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 SELENOVP59797 346 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 COL4A3Q01955 1670 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ACSF3Q4G176 576 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 FFAR4Q5NUL3 377 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 Q6ZVL8 140 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 AMZ2Q86W34 360 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ATP6V0BQ99437 205 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 HDAC8Q9BY41 377 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 RHBDD3Q9Y3P4 386 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 B4DGG1 531 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ERI3O43414 337 aaKnown RBP7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 SERF1AO75920 110 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 GJB5O95377 273 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 MT-CO2P00403 227 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ISG15P05161 165 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 OMGP23515 440 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 CTXN1P60606 82 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 YPEL3P61236 119 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ROM1Q03395 351 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 BATF2Q8N1L9 274 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 LRRC25Q8N386 305 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ASB10Q8WXI3 467 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 AMELYQ99218 206 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ATP5SQ99766 215 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 ZDHHC11Q9H8X9 412 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 DOCK3Q8IZD9 2030 aa7.43□□□□□ -1.22
SRGAP1-202ENST00000537556 UTRNP46939 3433 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 MPZL1O95297 269 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 HLA-DQA2P01906 255 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 ADMP35318 185 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF93P35789 620 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 MEF2BQ02080 365 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 FOXL1Q12952 345 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 HIST3H3Q16695 136 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 ALG10Q5BKT4 473 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 FAM78BQ5VT40 261 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 AMMECR1LQ6DCA0 310 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 RNF44Q7L0R7 432 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 LYZL2Q7Z4W2 148 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 CALHM1Q8IU99 346 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 MUC15Q8N387 334 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 OR52M1Q8NGK5 317 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 KCNG3Q8TAE7 436 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 TMEM171Q8WVE6 324 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 B9D1Q9UPM9 204 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 LOC107986453A0A1B0GWG9 222 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 GRIFINA4D1Z8 144 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 HS3ST1O14792 307 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 GNG7O60262 68 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 IFNA5P01569 189 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 MRPS34P82930 218 aaKnown RBP7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 RUNX1Q01196 453 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 TMEM187Q14656 261 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 RTP5Q14D33 572 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 CD226Q15762 336 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 PMCHL1Q16048 86 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 ABCA11PQ4W5N1 156 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 PLAC9Q5JTB6 97 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 LCN15Q6UWW0 184 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 LIAT1Q6ZQX7 453 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 HSD11B1LQ7Z5J1 315 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 TMEM252Q8N6L7 170 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 NICN1Q9BSH3 213 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 NAA60Q9H7X0 242 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF160Q9HCG1 818 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 LRIT1Q9P2V4 623 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 COLQQ9Y215 455 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 SPTBP11277 2137 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 SCN2AQ99250 2005 aa7.42□□□□□ -1.22
SRGAP1-202ENST00000537556 MYADML2A6NDP7 307 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 DPRXA6NFQ7 191 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 HIDE1A8MVS5 230 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF878C9JN71 531 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 TRAPPC2LH3BP13 241 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 SOCS1O15524 211 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 MPIG6BO95866 241 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 NRASP01111 189 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 KRASP01116 189 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 S100GP29377 79 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 DYNLT3P51808 116 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 PIGPP57054 158 aa7.41□□□□□ -1.22
SRGAP1-202ENST00000537556 DUSP28Q4G0W2 176 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms