RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CASC10Q5T4H9 136 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 TSPO2Q5TGU0 170 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 C9orf135Q5VTT2 229 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 ARL9Q6T311 187 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 C6orf89Q6UWU4 347 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 CCDC80Q76M96 950 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 EIF3MQ7L2H7 374 aaKnown RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 GRINAQ7Z429 371 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 LRRC28Q86X40 367 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 COX18Q8N8Q8 333 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 WFDC9Q8NEX5 89 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 OR10H4Q8NGA5 316 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 OR52E4Q8NGH9 312 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 OR9A2Q8NGT5 310 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 MUC7Q8TAX7 377 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 MAGOHBQ96A72 148 aaKnown RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 EXOSC8Q96B26 276 aaKnown RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 HAVCR1Q96D42 359 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 CHMP6Q96FZ7 201 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 TBX15Q96SF7 602 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 MRPL37Q9BZE1 423 aaKnown RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 PIGUQ9H490 435 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 UBAP1Q9NZ09 502 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 PIPOXQ9P0Z9 390 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 CHRNA9Q9UGM1 479 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RIMS3Q9UJD0 308 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 PRPF19Q9UMS4 504 aaKnown RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 PACSIN2Q9UNF0 486 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 CELA1Q9UNI1 258 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 SLC35A3Q9Y2D2 325 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RNF11Q9Y3C5 154 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 A0A096LPI6 279 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF816-ZNF321PA0A0X1KG74 233 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 LCE6AA0A183 80 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF99A8MXY4 864 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 TRAPPC2LH3BP13 241 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 K7EQM0 130 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 FCN1O00602 326 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 NDUFA2O43678 99 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ENSAO43768 121 aaKnown RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ANGPTL7O43827 346 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 OR2T1O43869 369 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 PRKYO43930 277 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 OR10H3O60404 316 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 RP2O75695 350 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 UBL3O95164 117 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 FARS2O95363 451 aaKnown RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 FSTL3O95633 263 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CSTAP01040 98 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 PDYNP01213 254 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 FGGP02679 453 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 PRB2P02812 416 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 SERPINA5P05154 406 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 GUSBP08236 651 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 IL3P08700 152 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 FBP1P09467 338 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 DNAH10OSP0CZ25 163 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CD79AP11912 226 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF35P13682 527 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 MGMTP16455 207 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF43P17038 809 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CXCR1P25024 350 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 GTF2E2P29084 291 aaKnown RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 HMOX2P30519 316 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CALCRP30988 508 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 HPCAL1P37235 193 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 MAP3K8P41279 467 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 GUCA1AP43080 201 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 GLP1RP43220 463 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 PRKXP51817 358 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ATP5IP56385 69 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF117Q03924 483 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF763Q0D2J5 394 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ST3GAL3Q11203 375 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 FOXF1Q12946 379 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF79Q15937 498 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 DEFB112Q30KQ8 113 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ARHGAP11BQ3KRB8 267 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 KRT71Q3SY84 523 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 HIKESHIQ53FT3 197 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 DMRTC1Q5HYR2 192 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 KLF17Q5JT82 389 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 AVPI1Q5T686 147 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 C1orf146Q5VVC0 180 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 STEAP4Q687X5 459 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CLEC6AQ6EIG7 209 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 NOXRED1Q6NXP6 359 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM53Q6P2H8 277 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 C5orf46Q6UWT4 87 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM107Q6UX40 140 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 COMTD1Q86VU5 262 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 NDUFA11Q86Y39 141 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 TGIF2LXQ8IUE1 241 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 VSTM4Q8IW00 320 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 SLC35F2Q8IXU6 374 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ANKFN1Q8N957 763 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 GATSQ8NAP1 163 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 DEFB108BQ8NET1 73 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 SDR9C7Q8NEX9 313 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 C16orf78Q8WTQ4 265 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms