RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 RNF144BQ7Z419 303 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 PQLC1Q8N2U9 271 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 OR4P4Q8NGL7 312 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 HAVCR2Q8TDQ0 301 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 TSEN15Q8WW01 171 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 CORO2AQ92828 525 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 CPNE2Q96FN4 548 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 ERVK13-1Q9NX77 482 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 DPM3Q9P2X0 92 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 DHDHQ9UQ10 334 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 RPL36Q9Y3U8 105 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 LOC100130705A0A1B0GUX0 176 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 ODAMA1E959 279 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 CSN2P05814 226 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 BRS3P32247 399 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 PTGFRP43088 359 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 GLIPR1P48060 266 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 BLCAPP62952 87 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 BDH1Q02338 343 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 KRBOX4Q5JUW0 171 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 PARP16Q8N5Y8 322 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 OR4D6Q8NGJ1 314 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 CAPSLQ8WWF8 208 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 SLC29A1Q99808 456 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 PDCD1LG2Q9BQ51 273 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 ING3Q9NXR8 418 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 KIAA2026Q5HYC2 2103 aa13.01□□□□□ -0.33
CLSTN3-204ENST00000535313 FAM90A22PA8MWA6 464 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 LEUTXA8MZ59 168 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
CLSTN3-204ENST00000535313 TOR1AO14656 332 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 MAGEB3O15480 346 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 CD28P10747 220 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 VDAC2P45880 294 aaPredicted RBP13□□□□□ -0.33
CLSTN3-204ENST00000535313 MTNR1BP49286 362 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 ZP1P60852 638 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 KLHL22Q53GT1 634 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF691Q5VV52 312 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 Q6P435 159 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 BAIAP2L2Q6UXY1 529 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 LYG1Q8N1E2 194 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 OR52I1Q8NGK6 324 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 STMN2Q93045 179 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 CREB3L1Q96BA8 519 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 AKR1E2Q96JD6 320 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 NOTCH3Q9UM47 2321 aa13□□□□□ -0.33
CLSTN3-204ENST00000535313 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 E9PI62 339 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 G3V4G9 280 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 RAB3AP20336 220 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 CEACAM3P40198 252 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 PRRX1P54821 245 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 ATXN7L3Q14CW9 347 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 RCN1Q15293 331 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 LPCAT4Q643R3 524 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 NDUFA11Q86Y39 141 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 OR4F17Q8NGA8 305 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 COQ2Q96H96 371 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 OR4F4Q96R69 305 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 NR1H4Q96RI1 486 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 GPER1Q99527 375 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF649Q9BS31 505 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 WNT10AQ9GZT5 417 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 MRPS18AQ9NVS2 196 aaKnown RBP12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 FAM118AQ9NWS6 357 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 OR6C3Q9NZP0 311 aa12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 NKX1-2Q9UD57 310 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF729A6NN14 1252 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 IGLV1-47P01700 117 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 CD34P28906 385 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 CDK5R1Q15078 307 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 ELP2Q6IA86 826 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 Q6ZS46 218 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF565Q8N9K5 539 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF555Q8NEP9 628 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 PXT1Q8NFP0 134 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 R3HDM4Q96D70 268 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 CITED2Q99967 270 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
CLSTN3-204ENST00000535313 H0YJX3 145 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 HSPB6O14558 160 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 BAG2O95816 211 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 CD2P06729 351 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 CD24P25063 80 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 NFYBP25208 207 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 GDNFP39905 211 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 SOX2P48431 317 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 RBM39Q14498 530 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 RSU1Q15404 277 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 PAN3Q58A45 887 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms