RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 RASL11BQ9BPW5 248 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 TRBV23-1A0A0A0MS06 115 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 OR10G9Q8NGN4 311 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 OR10G7Q8NGN6 311 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 C4orf45Q96LM5 186 aa11.17□□□□□ -0.62
SPG11-203ENST00000535302 RAB32Q13637 225 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 GUCA2BQ16661 112 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 TDRD6O60522 2096 aaKnown RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 PRRX1P54821 245 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 TRAV1-2A0A0B4J238 106 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 M0R296 226 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 POLR2GP62487 172 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPG11-203ENST00000535302 FUT7Q11130 342 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 FOXO1Q12778 655 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 CD226Q15762 336 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 BTF3P20290 206 aaKnown RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 SUCLG1P53597 346 aaKnown RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 MVDP53602 400 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 SPCS3P61009 180 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 PSG5Q15238 335 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 RNPS1Q15287 305 aaKnown RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 CTF1Q16619 201 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 ZFP64Q9NPA5 681 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 GZMKP49863 264 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 HOXA4Q00056 320 aaPredicted RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 KIAA0040Q15053 153 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 OR4D9Q8NGE8 314 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 COL22A1Q8NFW1 1626 aaPredicted RBP11.16□□□□□ -0.62
SPG11-203ENST00000535302 DHRS3O75911 302 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 HPXP02790 462 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 PPP1R1AQ13522 171 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 MOGAT3Q86VF5 341 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 D2HGDHQ8N465 521 aa11.16□□□□□ -0.62
SPG11-203ENST00000535302 NMUP48645 174 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 MMP15P51511 669 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 ALX3O95076 343 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 TWIST1Q15672 202 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 FAHD2BQ6P2I3 314 aaPredicted RBP11.15□□□□□ -0.62
SPG11-203ENST00000535302 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 SMIM4Q8WVI0 70 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 OR4C12Q96R67 309 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 IL20Q9NYY1 176 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 SCN7AQ01118 1682 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 NHSQ6T4R5 1651 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 HRASP01112 189 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 SELENOPP49908 381 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 UBE2L3P68036 154 aaKnown RBP11.15□□□□□ -0.62
SPG11-203ENST00000535302 HIKESHIQ53FT3 197 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 BHLHA15Q7RTS1 189 aaPredicted RBP11.15□□□□□ -0.62
SPG11-203ENST00000535302 OR5R1Q8NH85 324 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 NTNG2Q96CW9 530 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 UBE2L6O14933 153 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 GNG7O60262 68 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 HIST1H1DP16402 221 aaKnown RBP11.15□□□□□ -0.62
SPG11-203ENST00000535302 TMEM128Q5BJH2 165 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 FAM222BQ8WU58 562 aa11.15□□□□□ -0.62
SPG11-203ENST00000535302 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 MFNGO00587 321 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 SPINT1O43278 529 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 PLAUP00749 431 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 CRYBB2P43320 205 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.63
SPG11-203ENST00000535302 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
SPG11-203ENST00000535302 FGF2P09038 288 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 PRR35P0CG20 571 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 DLX1P56177 255 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 IQCJQ1A5X6 159 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 MAP6Q96JE9 813 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 SSX8Q7RTT4 187 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 LINC00469Q8N7U9 141 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 OR8B12Q8NGG6 310 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 RAB1BQ9H0U4 201 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 PAM16Q9Y3D7 125 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 LIMS3P0CW19 117 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 LIMS4P0CW20 117 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 GABRA6Q16445 453 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 OR8D4Q8NGM9 314 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 PTX4Q96A99 478 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 P2RX4Q99571 388 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 SCN9AQ15858 1988 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 PNLIPRP3Q17RR3 467 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 MUC20Q8N307 709 aaPredicted RBP11.14□□□□□ -0.63
SPG11-203ENST00000535302 PP6455Q8WZ26 134 aa11.14□□□□□ -0.63
SPG11-203ENST00000535302 MRPS18BQ9Y676 258 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms