RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MBD3L1Q8WWY6 194 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 TSSK6Q9BXA6 273 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 ACTR3CQ9C0K3 210 aaPredicted RBP-0.49□□□□□ -2.49
COPB1-212ENST00000534771 ASB7Q9H672 318 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 DBNDD1Q9H9R9 158 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 PLEKHA1Q9HB21 404 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 TMEM165Q9HC07 324 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 MYOFQ9NZM1 2061 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 KIAA2026Q5HYC2 2103 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 HMCN2Q8NDA2 5059 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 EIF4G1Q04637 1599 aaKnown RBP-0.49□□□□□ -2.49
COPB1-212ENST00000534771 ZNF106Q9H2Y7 1883 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 MYH11P35749 1972 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TNRC6AQ8NDV7 1962 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 CELSR1Q9NYQ6 3014 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 INTS1Q8N201 2190 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RYR1P21817 5038 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TRBV9A0A0B4J1U6 114 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TRAV8-4A0A0B4J246 113 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 LOC389332A0A1B0GUA5 103 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 C11orf86A6NJI1 115 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RFPL4AA6NLU0 287 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RFPL4AL1F8VTS6 287 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 J3QT63 122 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 K7EPI3 171 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 PEX11AO75192 247 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 ZNF737O75373 536 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 PGLYRP1O75594 196 aaPredicted RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 AGTP01019 485 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 P01737 135 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 SOD3P08294 240 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 OR4A8P0C604 315 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 MYL2P10916 166 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RALBP11234 206 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 NQO1P15559 274 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 P2RY2P41231 377 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 CTBP2P56545 445 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 SPINK7P58062 85 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RAB10P61026 200 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TMEM258P61165 79 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 SLC35A1P78382 337 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RPL18AQ02543 176 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 GBE1Q04446 702 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TSPAN31Q12999 210 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 IDI1Q13907 227 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 PPP1R7Q15435 360 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 OR8G1Q15617 311 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 MRPL23Q16540 153 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TMEM155Q4W5P6 130 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 SPATA31B1PQ5VZV4 182 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RNASEKQ6P5S7 137 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 TMEM107Q6UX40 140 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 C1orf158Q8N1D5 194 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 BHLHE23Q8NDY6 225 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 OR7G2Q8NG99 324 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 OR10Z1Q8NGY1 313 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 ZNF426Q9BUY5 554 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 ULBP1Q9BZM6 244 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 BCL2L14Q9BZR8 327 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 SMDT1Q9H4I9 107 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 REEP1Q9H902 201 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 NRBP2Q9NSY0 501 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 HPF1Q9NWY4 346 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 RCL1Q9Y2P8 373 aaKnown RBP-0.5□□□□□ -2.49
COPB1-212ENST00000534771 ZFYVE26Q68DK2 2539 aa-0.5□□□□□ -2.49
COPB1-212ENST00000534771 NF1P21359 2839 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 IGHV1-45A0A0A0MS14 117 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 TRAV41A0A0B4J266 112 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 A0A0B4J2E0 115 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 MDFIC2A0A1B0GVS7 189 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 CD300LBA8K4G0 201 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 GNRH2O43555 120 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 HUS1O60921 280 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ATRNO75882 1429 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 DHRS3O75911 302 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 CCNB2O95067 398 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 TTC4O95801 387 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 HIVEP1P15822 2718 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 NCF2P19878 526 aaPredicted RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 EIF2S2P20042 333 aaKnown RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 EVI2BP34910 448 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 CD200P41217 278 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 GLO1Q04760 184 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 GPR176Q14439 515 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 RPEL1Q2QD12 228 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 TRMT5Q32P41 509 aaKnown RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 SLC36A2Q495M3 483 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 TTC32Q5I0X7 151 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 PABPC1L2AQ5JQF8 200 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 MIA3Q5JRA6 1907 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 GPRASP1Q5JY77 1395 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 SETXQ7Z333 2677 aaKnown RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 DAW1Q8N136 415 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 TTC29Q8NA56 475 aaPredicted RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 TWIST2Q8WVJ9 160 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ARAP3Q8WWN8 1544 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ING5Q8WYH8 240 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 OLFM3Q96PB7 478 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 CENPKQ9BS16 269 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 AGMATQ9BSE5 352 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms