RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SRR	Q9GZT4	340 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR1A1	Q9P1Q5	309 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	AHCTF1	Q8WYP5	2266 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	UNC13C	Q8NB66	2214 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PYCARD-AS1	I3L0S3	204 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SPINK2	P20155	84 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CD80	P33681	288 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ATP5J2	P56134	94 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ADAMTS17	Q8TE56	1095 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CHODL	Q9H9P2	273 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TSPAN2	O60636	221 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TOX4	O94842	621 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SFT2D2	O95562	160 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ERG	P11308	486 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LYZ	P61626	148 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LY75	O60449	1722 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF638	Q14966	1978 aa	Known RBP	13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TRIP11	Q15643	1979 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC7A5P1	Q8MH63	180 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RXFP4	Q8TDU9	374 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ONECUT2	O95948	504 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	IGHA1	P01876	353 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC25A5	P05141	298 aa	Known RBP	13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	HOXA4	Q00056	320 aa	Predicted RBP	13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CXorf58	Q96LI9	332 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RSRP1	Q9BUV0	290 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RAB18	Q9NP72	206 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	GOLT1B	Q9Y3E0	138 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	WIPI2	Q9Y4P8	454 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CCL27	Q9Y4X3	112 aa		13.79	□□□□□ -0.2
NCAPD3-213	ENST00000534532	COX6A1	P12074	109 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	MAGEB1	P43366	347 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	H3F3C	Q6NXT2	135 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	STARD10	Q9Y365	291 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	IGHV3OR15-7	A0A075B7D8	119 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LOC101059948	A0A1B0GTJ6	334 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RFPL4A	A6NLU0	287 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RFPL4AL1	F8VTS6	287 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PAX5	Q02548	391 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LILRB4	Q8NHJ6	448 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RBPMS	Q93062	196 aa	Known RBP	13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC7A10	Q9NS82	523 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	GEMIN2	O14893	280 aa	Known RBP	13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	B3GALNT1	O75752	331 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PDGFA	P04085	211 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	MMD	Q15546	238 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ATP1A1-AS1	Q5TC04	95 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR52B4	Q8NGK2	314 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ATP5S	Q99766	215 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SNCG	O76070	127 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	NDUFB6	O95139	128 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LTBR	P36941	435 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PLAC9	Q5JTB6	97 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FFAR4	Q5NUL3	377 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC26A10	Q8NG04	563 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FOXJ2	Q9P0K8	574 aa		13.78	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OIP5	O43482	229 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CDCP2	Q5VXM1	449 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CLEC5A	Q9NY25	188 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ANXA10	Q9UJ72	324 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	IGKV1-8	A0A0C4DH67	115 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	NTN1	O95631	604 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	MMP16	P51512	607 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC35B1	P78383	322 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ATP6V1F	Q16864	119 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	DMKN	Q6E0U4	476 aa	Predicted RBP	13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	WDR89	Q96FK6	387 aa	Predicted RBP	13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	HARBI1	Q96MB7	349 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RNF2	Q99496	336 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC25A22	Q9H936	323 aa		13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.77	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF716	A6NP11	495 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CD200	P41217	278 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	H3F3A	P84243	136 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	SSX7	Q7RTT5	188 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CHST5	Q9GZS9	411 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	GAR1	Q9NY12	217 aa	Known RBP	13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	PRND	Q9UKY0	176 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ZMIZ1	Q9ULJ6	1067 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	SVIL	O95425	2214 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532		F5H697	171 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ACAA2	P42765	397 aa	Known RBP	13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	PDZK1IP1	Q13113	114 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532		Q6ZNX1	250 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR4D11	Q8NGI4	311 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ZDHHC8	Q9ULC8	765 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ZDBF2	Q9HCK1	2354 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	QSER1	Q2KHR3	1735 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	KIAA1217	Q5T5P2	1943 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OGG1	O15527	345 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	NDUFA2	O43678	99 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	PRDX2	P32119	198 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	AVPI1	Q5T686	147 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	NFAM1	Q8NET5	270 aa	Predicted RBP	13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532		Q8WTZ3	238 aa		13.77	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ICE1	Q9Y2F5	2266 aa		13.76	□□□□□ -0.21
NCAPD3-213	ENST00000534532	SMPD2	O60906	423 aa		13.76	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ORM2	P19652	201 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms