RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 PYGO2Q9BRQ0 406 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 CRLF2Q9HC73 371 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 TREX1Q9NSU2 369 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 VNN3Q9NY84 501 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 MYEF2Q9P2K5 600 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 IFT52Q9Y366 437 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 CAB39Q9Y376 341 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 NPTNQ9Y639 398 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 DSPPQ9NZW4 1301 aa3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 NUP214P35658 2090 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-223ENST00000534442 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 IGHV7-81A0A0B4J1V7 117 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 TCRBV9S1A1TA0A576 114 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 HACD1B0YJ81 288 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 H3BUX3 64 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 HSD17B6O14756 317 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 CHST1O43916 411 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 SERF1AO75920 110 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 TTC4O95801 387 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 SPNP16150 400 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 CBR1P16152 277 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 ZNF14P17017 642 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 MYCNOSP40205 109 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 SSR2P43308 183 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 ATP5IP56385 69 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 TFDP2Q14188 446 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 ALKBH6Q3KRA9 238 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 MOB1BQ7L9L4 216 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 H2BFWTQ7Z2G1 175 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 LRRC28Q86X40 367 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 EGFL6Q8IUX8 553 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 ZFP90Q8TF47 636 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 DNAJA4Q8WW22 397 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 CHCHD10Q8WYQ3 142 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 PEX13Q92968 403 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 FGGYQ96C11 551 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 DUS3LQ96G46 650 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 CLCC1Q96S66 551 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 FMO2Q99518 471 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 NMUR2Q9GZQ4 415 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 ANKRD19PQ9H560 264 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 REEP4Q9H6H4 257 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 TAAR3PQ9P1P4 343 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 RWDD2AQ9UIY3 292 aa3.11□□□□□ -1.91
ECHDC1-223ENST00000534442 ENSAO43768 121 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 SRSF10O75494 262 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 LGI1O95970 557 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 IGHV3-48P01763 117 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 TPM2P07951 284 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 C1GALT1C1LP0DN25 315 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 HTR1FP30939 366 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 ARR3P36575 388 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 CFHR2P36980 270 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OR3A4PP47883 348 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 AP1S2P56377 157 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OXA1LQ15070 435 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 C1orf134Q5TEV5 83 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 TSPO2Q5TGU0 170 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OR52E8Q6IFG1 317 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 CASP12Q6UXS9 341 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 Q6ZR54 194 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 PGAP1Q75T13 922 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 NANOGNBQ7Z5D8 188 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 ABHD12BQ7Z5M8 362 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 THOC6Q86W42 341 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 PPP1R27Q86WC6 154 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 CEND1Q8N111 149 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OTUD6BQ8N6M0 293 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OR10H4Q8NGA5 316 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OR4K14Q8NGD5 310 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OR52R1Q8NGF1 315 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 OR1L6Q8NGR2 347 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 CREB3L1Q96BA8 519 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 PLEKHA8Q96JA3 519 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 KCNA7Q96RP8 456 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 TBL1XR1Q9BZK7 514 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 PKIBQ9C010 78 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 RBKSQ9H477 322 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 EHD1Q9H4M9 534 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 NHEJ1Q9H9Q4 299 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 THUMPD1Q9NXG2 353 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 SLC7A8Q9UHI5 535 aa3.1□□□□□ -1.91
ECHDC1-223ENST00000534442 IGLV2-18A0A075B6J9 118 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 ZNF879B4DU55 563 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 LGALS9O00182 355 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 RAD51CO43502 376 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 CST8O60676 142 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 UPK3AO75631 287 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 PROSCO94903 275 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 OXSR1O95747 527 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 PAHP00439 452 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 OTCP00480 354 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 CPMP14384 443 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 GTF2E2P29084 291 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 VDAC2P45880 294 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 P2RY4P51582 365 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 XKP51811 444 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 PKNOX1P55347 436 aa3.09□□□□□ -1.91
ECHDC1-223ENST00000534442 HAMPP81172 84 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms