RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 IFNA21P01568 189 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 PTGER4P35408 488 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 OR3A2P47893 321 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ZFP36L1Q07352 338 aaKnown RBP16.69■□□□□ 0.26
SMPD1-210ENST00000534405 PTCRAQ6ISU1 281 aaPredicted RBP16.69■□□□□ 0.26
SMPD1-210ENST00000534405 RTN4RL2Q86UN3 420 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 NUDT22Q9BRQ3 303 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ABHD14AQ9BUJ0 271 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 CNTD2Q9H8S5 307 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 FOXJ2Q9P0K8 574 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 B3GALT5Q9Y2C3 310 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 R4GMQ9 66 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 LOC107986453A0A1B0GWG9 222 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 DUX1O43812 170 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 SCGB1D2O95969 90 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 MAJINQ3KP22 176 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF66Q6ZN08 573 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 SLC25A45Q8N413 288 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ASB10Q8WXI3 467 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ALKBH3Q96Q83 286 aaPredicted RBP16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ELOVL1Q9BW60 279 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 MED29Q9NX70 200 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 BPNT1O95861 308 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 GSTP1P09211 210 aaKnown RBP16.68■□□□□ 0.26
SMPD1-210ENST00000534405 CEACAM8P31997 349 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-210ENST00000534405 CADM4Q8NFZ8 388 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 OR5H2Q8NGV7 314 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 SHISA8B8ZZ34 492 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 CCL25O15444 150 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 TNFSF13O75888 250 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 VSIG8P0DPA2 414 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 CHRNB4P30926 498 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 VAMP2P63027 116 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 FAM90A2PQ658T7 463 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 TIPARPQ7Z3E1 657 aaKnown RBP16.68■□□□□ 0.26
SMPD1-210ENST00000534405 OR2G3Q8NGZ4 309 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 HAS2Q92819 552 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 RBMXL1Q96E39 390 aaKnown RBP16.68■□□□□ 0.26
SMPD1-210ENST00000534405 FOXQ1Q9C009 403 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 AK3Q9UIJ7 227 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 HHLA2Q9UM44 414 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 VDAC3Q9Y277 283 aa16.68■□□□□ 0.26
SMPD1-210ENST00000534405 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 RAC2P15153 192 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 BCKDHBP21953 392 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 OR14L1PQ8NHC6 308 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 MRPL24Q96A35 216 aaKnown RBP16.67■□□□□ 0.26
SMPD1-210ENST00000534405 KCNK17Q96T54 332 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF2Q9BSG1 426 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-210ENST00000534405 GPR35Q9HC97 309 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 ADAMTS20P59510 1910 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 PPBPP02775 128 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 TDGF1P13385 188 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 TFPI2P48307 235 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 ZFP62Q8NB50 900 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-210ENST00000534405 SLC38A9Q8NBW4 561 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF700Q9H0M5 742 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 HIPK2Q9H2X6 1198 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 EXPH5Q8NEV8 1989 aa16.67■□□□□ 0.26
SMPD1-210ENST00000534405 FAM230AA0A1W2PPH8 454 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 PRSS47A8MTI9 375 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 CIDEAO60543 219 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 PFN1P07737 140 aaKnown RBP16.66■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF823P16415 610 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 POU3F1Q03052 451 aaPredicted RBP16.66■□□□□ 0.26
SMPD1-210ENST00000534405 PRDX4Q13162 271 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 BATFQ16520 125 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 TBX15Q96SF7 602 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 B3GAT1Q9P2W7 334 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 FBLN5Q9UBX5 448 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 CEP192Q8TEP8 1941 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 NSG1A0A0A6YYJ2 146 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 NPIPA5E9PKD4 350 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 P2RY10O00398 339 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF43P17038 809 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 RPL23AP62750 156 aaKnown RBP16.66■□□□□ 0.26
SMPD1-210ENST00000534405 SMIM15Q7Z3B0 74 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 ORAOV1Q8WV07 137 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 TP53RKQ96S44 253 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 SDF2L1Q9HCN8 221 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 GLRX2Q9NS18 164 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 NPIPA1Q9UND3 350 aa16.66■□□□□ 0.26
SMPD1-210ENST00000534405 LOC102723971A0A1B0GUV8 181 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 ANKUB1A6NFN9 424 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 GLB1P16278 677 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 IGFBP4P22692 258 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 PTTG1IPP53801 180 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 RANP62826 216 aaKnown RBP16.65■□□□□ 0.26
SMPD1-210ENST00000534405 NFAM1Q8NET5 270 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-210ENST00000534405 TMEM234Q8WY98 164 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 SLC35E1Q96K37 410 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 EMC6Q9BV81 110 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 GPR84Q9NQS5 396 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 CENPMQ9NSP4 180 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 C14orf166Q9Y224 244 aaKnown RBP16.65■□□□□ 0.26
SMPD1-210ENST00000534405 ASCC3Q8N3C0 2202 aaKnown RBP16.65■□□□□ 0.26
SMPD1-210ENST00000534405 ISG15P05161 165 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 TMEM225BP0DP42 221 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 FOSL2P15408 326 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 ATP6V0CP27449 155 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms