RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 RAB9AP51151 201 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 CD81P60033 236 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 ERVK11-1P61568 191 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
CD44-237ENST00000534082 IFFO1Q0D2I5 559 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 MADCAM1Q13477 382 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 EBI3Q14213 229 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 KPNB1Q14974 876 aaKnown RBP4.88□□□□□ -1.63
CD44-237ENST00000534082 RBMY1FQ15415 496 aaKnown RBP4.88□□□□□ -1.63
CD44-237ENST00000534082 AGKQ53H12 422 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 SLC35F1Q5T1Q4 408 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 LCN12Q6JVE5 192 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 KRT74Q7RTS7 529 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 LYG2Q86SG7 212 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 IZUMO1Q8IYV9 350 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 DEFB125Q8N687 156 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 FAM86B1Q8N7N1 296 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 OR8B12Q8NGG6 310 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 OR52N4Q8NGI2 321 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 OR2T4Q8NH00 348 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 OR9G1Q8NH87 305 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 PHLDA1Q8WV24 401 aaPredicted RBP4.88□□□□□ -1.63
CD44-237ENST00000534082 RNF133Q8WVZ7 376 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 S1PR3Q99500 378 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 RASL11BQ9BPW5 248 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 IFT27Q9BW83 186 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 WFDC10AQ9H1F0 79 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 ANKRD19PQ9H560 264 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 NIPAL2Q9H841 368 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 SRD5A3Q9H8P0 318 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 RABL2AQ9UBK7 228 aaPredicted RBP4.88□□□□□ -1.63
CD44-237ENST00000534082 CD300AQ9UGN4 299 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 IZUMO1RA6ND01 250 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 F8VVB4 439 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 F8VWA3 439 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 G3V318 75 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 HSD17B6O14756 317 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 MGST3O14880 152 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 CDK2AP2O75956 126 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 NDUFB8O95169 186 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 HAND1O96004 215 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 MPZP25189 248 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 NFYBP25208 207 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 ERP29P30040 261 aaKnown RBP4.87□□□□□ -1.63
CD44-237ENST00000534082 OPRL1P41146 370 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 OR3A1P47881 315 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 TNFRSF9Q07011 255 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 TEX30Q5JUR7 227 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 ZNF684Q5T5D7 378 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 SLX4IPQ5VYV7 408 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 VTCN1Q7Z7D3 282 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 Q8N1X5 172 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 Q8N402 240 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 SYT8Q8NBV8 401 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 OR52L1Q8NGH7 329 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 OR4D6Q8NGJ1 314 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 OR2T10Q8NGZ9 312 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 TSPEARQ8WU66 669 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 TSEN15Q8WW01 171 aaKnown RBP4.87□□□□□ -1.63
CD44-237ENST00000534082 LEAP2Q969E1 77 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 FLYWCH2Q96CP2 140 aaKnown RBP4.87□□□□□ -1.63
CD44-237ENST00000534082 RNF183Q96D59 192 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 AMELYQ99218 206 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 MNTQ99583 582 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 ABHD6Q9BV23 337 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 OR52D1Q9H346 318 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 PLEKHA1Q9HB21 404 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 PLSCR3Q9NRY6 295 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 GPR173Q9NS66 373 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 NDE1Q9NXR1 346 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 TAS2R3Q9NYW6 316 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 OR6C3Q9NZP0 311 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 IL36RNQ9UBH0 155 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 ZNF107Q9UII5 783 aaPredicted RBP4.87□□□□□ -1.63
CD44-237ENST00000534082 FBXO7Q9Y3I1 522 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 U3KQV3 271 aa4.87□□□□□ -1.63
CD44-237ENST00000534082 TRAV41A0A0B4J266 112 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 PQLC2LA1A4F0 135 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 FAM90A10PA6NDY2 464 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 BOLA2-SMG1P6H3BVE0 249 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 J3QR06 171 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 DLGAP1O14490 977 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 ANGPT2O15123 496 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 RTL8CO15255 209 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 ATP6V0E1O15342 81 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 IDH3BO43837 385 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 IGHV3-11P01762 117 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 IGHV3-7P01780 117 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 HSPB1P04792 205 aaKnown RBP4.86□□□□□ -1.63
CD44-237ENST00000534082 GYPBP06028 91 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 H2BFMP0C1H6 154 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 ATF4P18848 351 aaPredicted RBP4.86□□□□□ -1.63
CD44-237ENST00000534082 FMO3P31513 532 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 KDELR2P33947 212 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 REG1BP48304 166 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 SELENOWP63302 87 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 RIPPLY1Q0D2K3 151 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 IL24Q13007 206 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 LCN1P1Q5VSP4 162 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms