RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 COMMD4Q9H0A8 199 aa13.43□□□□□ -0.26
CAPRIN1-216ENST00000534042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAPRIN1-216ENST00000534042 ING3Q9NXR8 418 aa13.43□□□□□ -0.26
CAPRIN1-216ENST00000534042 OOSP1A8MZH6 123 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 KDM4BO94953 1096 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 ISG15P05161 165 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR3A4PP47883 348 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 KRTAP10-11P60412 298 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 RBM39Q14498 530 aaKnown RBP13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 KRBOX4Q5JUW0 171 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 CCDC144NLQ6NUI1 221 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 KCTD20Q7Z5Y7 419 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 OSR2Q8N2R0 312 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 SPACA5Q96QH8 159 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 MBOAT4Q96T53 435 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 RIBC2Q9H4K1 309 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 NEK6Q9HC98 313 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 FRRS1LQ9P0K9 344 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 AP4S1Q9Y587 144 aa13.42□□□□□ -0.26
CAPRIN1-216ENST00000534042 A0A087X0M5 115 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 A0A1B0GX30 115 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 WI2-2373I1.2A0A1W2PRP0 233 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 ZNF729A6NN14 1252 aaPredicted RBP13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 LY6LH3BQJ8 138 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 CSN2P05814 226 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 FAM106CPP0CH98 169 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 C11orf87Q6NUJ2 197 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 FDX2Q6P4F2 183 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 CHST4Q8NCG5 386 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 DPF1Q92782 380 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 COQ2Q96H96 371 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 GPR61Q9BZJ8 451 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 RHOFQ9HBH0 211 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 DNAH3Q8TD57 4116 aa13.41□□□□□ -0.26
CAPRIN1-216ENST00000534042 PSMB11A5LHX3 300 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 DEGS1O15121 323 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 MT-ND2P03891 347 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 HTR1AP08908 422 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 FCGR1AP12314 374 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 NFYBP25208 207 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 NANOS3P60323 173 aaKnown RBP13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 EGFEM1PQ0D2K5 195 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 C17orf58Q2M2W7 97 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 Q6P435 159 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 RNF144BQ7Z419 303 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 SAXO1Q8IYX7 474 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 LINC00482Q8N8I6 264 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR51D1Q8NGF3 324 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR13C3Q8NGS6 347 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR13C9Q8NGT0 318 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR10AC1Q8NH08 325 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR9G1Q8NH87 305 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 RPEQ96AT9 228 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 ZNF649Q9BS31 505 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 GABARAPL3Q9BY60 117 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 OR6C3Q9NZP0 311 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 MOB4Q9Y3A3 225 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
CAPRIN1-216ENST00000534042 DAPL1A0PJW8 107 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 E9PQ18 207 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 CCR9P51686 369 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 BNIP1Q12981 228 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 ATXN7L3Q14CW9 347 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 TOMM40LQ969M1 308 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 HRASLS5Q96KN8 279 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 PCDHB16Q9NRJ7 776 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 AMMECR1Q9Y4X0 333 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
CAPRIN1-216ENST00000534042 KBTBD11-OT1A0A1B0GTJ5 212 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A18PA6NE21 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A16PA6NEW6 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A20PA6NIJ5 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A9PA6NNJ1 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A12PA8MX19 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A5PA8MXJ8 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 SLC16A6O15403 523 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A15PP0C7V4 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A13PP0C7W8 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A14PP0C7W9 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 FAM90A24PP0C7X0 464 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 TMEM225BP0DP42 221 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 UTF1Q5T230 341 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 ZNF329Q86UD4 541 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 MRPL41Q8IXM3 137 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 OR51A4Q8NGJ6 313 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 TRUB1Q8WWH5 349 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 RNFT2Q96EX2 444 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 KIRREL1Q96J84 757 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 PPIL3Q9H2H8 161 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 ZCCHC4Q9H5U6 513 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 IMPAD1Q9NX62 359 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 OAZ3Q9UMX2 235 aa13.38□□□□□ -0.27
CAPRIN1-216ENST00000534042 OR4C45A6NMZ5 311 aa13.37□□□□□ -0.27
CAPRIN1-216ENST00000534042 J3QLW9 94 aa13.37□□□□□ -0.27
CAPRIN1-216ENST00000534042 SNRNP70P08621 437 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-216ENST00000534042 HCKP08631 526 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms