RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 SLX4IPQ5VYV7 408 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 Q6ZSR3 168 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 AQP11Q8NBQ7 271 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 OR9G1Q8NH87 305 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 LINC00476Q8WZB0 136 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 COQ2Q96H96 371 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 KIRREL1Q96J84 757 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
SVIP-205ENST00000533774 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 ALX4Q9H161 411 aaPredicted RBP9.49□□□□□ -0.89
SVIP-205ENST00000533774 GORASP2Q9H8Y8 452 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 RETNQ9HD89 108 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 IL1RAPQ9NPH3 570 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 PLSCR3Q9NRY6 295 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 COPS3Q9UNS2 423 aa9.49□□□□□ -0.89
SVIP-205ENST00000533774 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
SVIP-205ENST00000533774 IGHV3-72A0A0B4J1Y9 119 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 A8MZ25 164 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 J3QR06 171 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 TNFRSF11BO00300 401 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 MAGEB4O15481 346 aaPredicted RBP9.48□□□□□ -0.89
SVIP-205ENST00000533774 SLURP1P55000 103 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 PSME3P61289 254 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 RUNX1Q01196 453 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 ZNF146Q15072 292 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 TGIF2LXQ8IUE1 241 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 KCTD7Q96MP8 289 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 LIN7CQ9NUP9 197 aaKnown RBP9.48□□□□□ -0.89
SVIP-205ENST00000533774 MRGBPQ9NV56 204 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 ING3Q9NXR8 418 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 LAMP5Q9UJQ1 280 aa9.48□□□□□ -0.89
SVIP-205ENST00000533774 MUC4Q99102 2169 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 ODAMA1E959 279 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 NCBP2LA6PVI3 153 aaKnown RBP9.47□□□□□ -0.89
SVIP-205ENST00000533774 CCNB2O95067 398 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 OR2H2O95918 312 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 SLC2A5P22732 501 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 PTGFRP43088 359 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 GABPB1Q06547 395 aaPredicted RBP9.47□□□□□ -0.89
SVIP-205ENST00000533774 ACSM6Q6P461 480 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 DEGS2Q6QHC5 323 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 PLEKHG7Q6ZR37 379 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 FAM58AQ8N1B3 248 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 OR4D6Q8NGJ1 314 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 ST6GALNAC6Q969X2 333 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 HRASLS5Q96KN8 279 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 NIPSNAP1Q9BPW8 284 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 GON7Q9BXV9 100 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 DGCR6LQ9BY27 220 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 PPIL3Q9H2H8 161 aaKnown RBP9.47□□□□□ -0.89
SVIP-205ENST00000533774 PCDHB16Q9NRJ7 776 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 PSG11Q9UQ72 335 aa9.47□□□□□ -0.89
SVIP-205ENST00000533774 TRBV2A0A0J9YWF9 115 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 A0A1W2PPE3 182 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 KRT36O76013 467 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 MRPL3P09001 348 aaKnown RBP9.46□□□□□ -0.9
SVIP-205ENST00000533774 PRKACAP17612 351 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 MTNR1BP49286 362 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 ROM1Q03395 351 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 CPOQ8IVL8 374 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 ZNF679Q8IYX0 411 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 ELMOD2Q8IZ81 293 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 OR8H3Q8N146 312 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 OR6Q1Q8NGQ2 317 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 ARPC1AQ92747 370 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 MCUR1Q96AQ8 359 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 FAM110AQ9BQ89 295 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 EFCAB1Q9HAE3 211 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.46□□□□□ -0.9
SVIP-205ENST00000533774 GTF2A1LQ9UNN4 478 aa9.46□□□□□ -0.9
SVIP-205ENST00000533774 IGHV1-3A0A0C4DH29 117 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 ZNF729A6NN14 1252 aaPredicted RBP9.45□□□□□ -0.9
SVIP-205ENST00000533774 ZNF736B4DX44 427 aaPredicted RBP9.45□□□□□ -0.9
SVIP-205ENST00000533774 PPIFP30405 207 aaKnown RBP9.45□□□□□ -0.9
SVIP-205ENST00000533774 REG1BP48304 166 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 GNG10P50151 68 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 RAB7AP51149 207 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 MADCAM1Q13477 382 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 ZNF829Q3KNS6 432 aaPredicted RBP9.45□□□□□ -0.9
SVIP-205ENST00000533774 LYPD6Q86Y78 171 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 ENTHD1Q8IYW4 607 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 DDB2Q92466 427 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 S1PR3Q99500 378 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 APOL4Q9BPW4 351 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 NABP2Q9BQ15 211 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 MROQ9BYG7 248 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 YIPF3Q9GZM5 350 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 TPSG1Q9NRR2 321 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 OR52A1Q9UKL2 312 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 VSIG4Q9Y279 399 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 GSTK1Q9Y2Q3 226 aa9.45□□□□□ -0.9
SVIP-205ENST00000533774 AMMECR1Q9Y4X0 333 aaPredicted RBP9.45□□□□□ -0.9
SVIP-205ENST00000533774 IGKV1-12A0A0C4DH73 117 aa9.44□□□□□ -0.9
SVIP-205ENST00000533774 KBTBD11-OT1A0A1B0GTJ5 212 aa9.44□□□□□ -0.9
SVIP-205ENST00000533774 CCDC182A6NF36 153 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms