RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 OR56B2PQ8NGI1 322 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 LRRC20Q8TCA0 184 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 GALNT14Q96FL9 552 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 C2orf50Q96LR7 162 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 PKIBQ9C010 78 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 DNTTIP1Q9H147 329 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 RIMS4Q9H426 269 aaPredicted RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 LDAHQ9H6V9 325 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 SPACA1Q9HBV2 294 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 CHMP1AQ9HD42 196 aaPredicted RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 TUBG2Q9NRH3 451 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 C1orf123Q9NWV4 160 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 RCC2Q9P258 522 aaKnown RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 CLCF1Q9UBD9 225 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 AK3Q9UIJ7 227 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 ST3GAL6Q9Y274 331 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 GTF3C1Q12789 2109 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ZGRF1Q86YA3 2104 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 TRAV17A0A0B4J275 112 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 hCG_1807616A0A1W2PRN6 198 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 CRYM-AS1A6NIL9 109 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ZNF850A8MQ14 1090 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 AQP7O14520 342 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ANGPTL7O43827 346 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 IFNA2P01563 188 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 NMBP08949 121 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 OR5H8P0DN80 308 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 SERPINF1P36955 418 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 RFC3P40938 356 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 TGFBR3Q03167 851 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 PRDX4Q13162 271 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 IL15RAQ13261 267 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 IL13RA2Q14627 380 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 RGS7BPQ6MZT1 257 aaPredicted RBP8.29□□□□□ -1.08
CHKA-207ENST00000533728 COMMD7Q86VX2 200 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 SGPP2Q8IWX5 399 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 FAM185AQ8N0U4 392 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 FBXL14Q8N1E6 418 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ZNF611Q8N823 705 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 LRTM2Q8N967 370 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 INO80EQ8NBZ0 244 aaPredicted RBP8.29□□□□□ -1.08
CHKA-207ENST00000533728 C1orf162Q8NEQ5 155 aaPredicted RBP8.29□□□□□ -1.08
CHKA-207ENST00000533728 STOML3Q8TAV4 291 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 CASTOR1Q8WTX7 329 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ZNF75AQ96N20 296 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 HIST1H2AAQ96QV6 131 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 CITED4Q96RK1 184 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 SULT4A1Q9BR01 284 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 SUCNR1Q9BXA5 334 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 IFT22Q9H7X7 185 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 C12orf4Q9NQ89 552 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ZFP57Q9NU63 452 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 ZNF701Q9NV72 531 aaPredicted RBP8.29□□□□□ -1.08
CHKA-207ENST00000533728 SPRR3Q9UBC9 169 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 LIPGQ9Y5X9 500 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 KCNMB2Q9Y691 235 aa8.29□□□□□ -1.08
CHKA-207ENST00000533728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.081e-6■□□□□ 8.5
CHKA-207ENST00000533728 TRBV6-6A0A0A6YYG2 114 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PIGBOS1A0A0B4J2F0 54 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 TEX13DA0A0J9YY54 714 aaPredicted RBP8.28□□□□□ -1.08
CHKA-207ENST00000533728 C5orf49A4QMS7 147 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 ANKRD30BLA7E2S9 258 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 CD300LBA8K4G0 201 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 F8VVB4 439 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 F8VWA3 439 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 IL18BPO95998 194 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 HLA-HP01893 362 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PDGFAP04085 211 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 SFTPBP07988 381 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 CTXN2P0C2S0 81 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 CD79AP11912 226 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PGAM2P15259 253 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 RBMXP38159 391 aaKnown RBP8.28□□□□□ -1.08
CHKA-207ENST00000533728 GLP1RP43220 463 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 GUSBP1Q15486 140 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 AANATQ16613 207 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 NKAPLQ5M9Q1 402 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PRSS54Q6PEW0 395 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 FBXW12Q6X9E4 464 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 KCTD9Q7L273 389 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 HSD17B13Q7Z5P4 300 aaPredicted RBP8.28□□□□□ -1.08
CHKA-207ENST00000533728 ZNF573Q86YE8 665 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PDZD9Q8IXQ8 264 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 SLC38A6Q8IZM9 456 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 OR5P3Q8WZ94 311 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 MOB3AQ96BX8 217 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 ARPC5LQ9BPX5 153 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 SYT3Q9BQG1 590 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 ZNF2Q9BSG1 426 aaPredicted RBP8.28□□□□□ -1.08
CHKA-207ENST00000533728 FAAP24Q9BTP7 215 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
CHKA-207ENST00000533728 RASL12Q9NYN1 266 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 ZNF230Q9UIE0 474 aaPredicted RBP8.28□□□□□ -1.08
CHKA-207ENST00000533728 KCNIP3Q9Y2W7 256 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 STARD10Q9Y365 291 aa8.28□□□□□ -1.08
CHKA-207ENST00000533728 SESN1Q9Y6P5 492 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms