RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CASTOR1Q8WTX7 329 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 MAL2Q969L2 176 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 CMBLQ96DG6 245 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 VAT1Q99536 393 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 B9D2Q9BPU9 175 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 ULBP1Q9BZM6 244 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 CXCL16Q9H2A7 254 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 DDIT4Q9NX09 232 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 DNAJC27Q9NZQ0 273 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 VPREB3Q9UKI3 123 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 HSPE1-MOB4S4R3N1 261 aa0.84□□□□□ -2.27
ATM-220ENST00000533526 NUP205Q92621 2012 aa0.84□□□□□ -2.28
ATM-220ENST00000533526 PLXNA3P51805 1871 aa0.84□□□□□ -2.28
ATM-220ENST00000533526 TMEM131Q92545 1883 aa0.84□□□□□ -2.28
ATM-220ENST00000533526 ATRNO75882 1429 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 TRAV8-7A0A075B6U6 113 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 IGHV1-45A0A0A0MS14 117 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 C19orf71A6NCJ1 209 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 ERICH4A6NGS2 130 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 H0YIV9 168 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 LIPCP11150 499 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 GABRA1P14867 456 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 PSMB9P28065 219 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 BCAP31P51572 246 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 GBE1Q04446 702 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 PRDX4Q13162 271 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 CEACAM16Q2WEN9 425 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 HIKESHIQ53FT3 197 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 HSP90AA4PQ58FG1 418 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 C10orf91Q5T1B1 145 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 MUC15Q8N387 334 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 PEX13Q92968 403 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 DNAJC30Q96LL9 226 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 TTTY12Q9BZ98 90 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 SLC19A3Q9BZV2 496 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 ZNF436Q9C0F3 470 aaPredicted RBP0.83□□□□□ -2.28
ATM-220ENST00000533526 NXF2Q9GZY0 626 aaKnown RBP0.83□□□□□ -2.28
ATM-220ENST00000533526 OR2AG1Q9H205 316 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 PSORS1C2Q9UIG4 136 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 CCL26Q9Y258 94 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 ADAMTS7Q9UKP4 1686 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 KMT2EQ8IZD2 1858 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 PHLPP2Q6ZVD8 1323 aa0.83□□□□□ -2.28
ATM-220ENST00000533526 A0A1W2PRG6 482 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 NCF1BA6NI72 391 aaPredicted RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 KNCNA6PVL3 124 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 NCF1CA8MVU1 366 aaPredicted RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 EEF1E1O43324 174 aaKnown RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 RAB36O95755 333 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 OR12D1P0DN82 309 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 PRKACAP17612 351 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 COILP38432 576 aaPredicted RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 DSTNP60981 165 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 C2orf80Q0P641 193 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 DYNC1I2Q13409 638 aaKnown RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 TAL2Q16559 108 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 SLC25A25Q6KCM7 469 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 TCF23Q7RTU1 214 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 LINC00523Q86TU6 105 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 FAM58AQ8N1B3 248 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 GAPTQ8N292 157 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 C2orf73Q8N5S3 287 aaPredicted RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 OR5C1Q8NGR4 320 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 DOK4Q8TEW6 326 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 BLNKQ8WV28 456 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 HIST1H2BAQ96A08 127 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 FAM131CQ96AQ9 280 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 CPB2Q96IY4 423 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 BCL2L14Q9BZR8 327 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 AICDAQ9GZX7 198 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 ARL6Q9H0F7 186 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 VAPAQ9P0L0 249 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 RBM12B-AS1Q9P1G2 102 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 SLC23A2Q9UGH3 650 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 RPUSD1Q9UJJ7 312 aaKnown RBP0.82□□□□□ -2.28
ATM-220ENST00000533526 PSME2Q9UL46 239 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 LINC00588Q9Y4M8 146 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 KPTNQ9Y664 436 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 WDR19Q8NEZ3 1342 aa0.82□□□□□ -2.28
ATM-220ENST00000533526 SLIT2O94813 1529 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 LOC100653049A0A140TA62 436 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 C17orf98A8MV24 154 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 PLPP3O14495 311 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 LECT2O14960 151 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 HMMRO75330 724 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 KRT34O76011 436 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 MYO1DO94832 1006 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 TPM2P07951 284 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 SRMP19623 302 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 CRABP1P29762 137 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 BLVRBP30043 206 aaPredicted RBP0.81□□□□□ -2.28
ATM-220ENST00000533526 DOC2AQ14183 400 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 ACTBL2Q562R1 376 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 NXNL2Q5VZ03 156 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 NIPAL1Q6NVV3 410 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 SCXQ7RTU7 201 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 TCAIMQ8N3R3 496 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 ATPAF2Q8N5M1 289 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 DEFB119Q8N690 84 aa0.81□□□□□ -2.28
ATM-220ENST00000533526 OR10P1Q8NGE3 313 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms