RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 OR4D10Q8NGI6 311 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF251Q9BRH9 671 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 EP300Q09472 2414 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-205ENST00000533464 COX7A2P2O60397 106 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 SP1P08047 785 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 STARD6P59095 220 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 VMA21Q3ZAQ7 101 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF429Q86V71 674 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 RYDENQ9NUL5 291 aaKnown RBP15.38■□□□□ 0.05
PHRF1-205ENST00000533464 CEBPEQ15744 281 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 PHYHD1Q5SRE7 291 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 SAP25Q8TEE9 199 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 DNASE2BQ8WZ79 361 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 GPR137Q96N19 417 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 SLC2A9Q9NRM0 540 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 ZMIZ1Q9ULJ6 1067 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 MNX1P50219 401 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-205ENST00000533464 SPINK9Q5DT21 86 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 LIAT1Q6ZQX7 453 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF561Q8N587 486 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 ADAD2Q8NCV1 583 aaKnown RBP15.38■□□□□ 0.05
PHRF1-205ENST00000533464 GDF15Q99988 308 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 FAM90A27PA6NNH2 459 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 ROM1Q03395 351 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 FFAR4Q5NUL3 377 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 FBXW9Q5XUX1 488 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 GAPTQ8N292 157 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 TMEM104Q8NE00 496 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 OR5B3Q8NH48 314 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 ANGPTL6Q8NI99 470 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 TTTY12Q9BZ98 90 aa15.38■□□□□ 0.05
PHRF1-205ENST00000533464 IGHV1-45A0A0A0MS14 117 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 C7orf66A4D0T2 115 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 ADAM10O14672 748 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 AGFG2O95081 481 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 APOBEC4Q8WW27 367 aaKnown RBP15.37■□□□□ 0.05
PHRF1-205ENST00000533464 DYRK2Q92630 601 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 IGLV1-36A0A0B4J1U3 117 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 J3QT63 122 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 SOX15O60248 233 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 CRYBA2P53672 197 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF528Q3MIS6 628 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 OR5D13Q8NGL4 314 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 MRPL24Q96A35 216 aaKnown RBP15.37■□□□□ 0.05
PHRF1-205ENST00000533464 PTX4Q96A99 478 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 KCNK17Q96T54 332 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 LRFN3Q9BTN0 628 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 TRBV5-5A0A0J9YX44 114 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 H0Y8G0 127 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 RAB7AP51149 207 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 BHLHA15Q7RTS1 189 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-205ENST00000533464 ANGPTL4Q9BY76 406 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 TGIF2Q9GZN2 237 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 NARFLQ9H6Q4 476 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 CCL28Q9NRJ3 127 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 TRAV39A0A0B4J263 110 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 A0A1W2PR77 199 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 CRYM-AS1A6NIL9 109 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 ANKRD34CP0C6C1 535 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 FGF5P12034 268 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 VDAC1P21796 283 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 OR5A2Q8NGI9 324 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 HDHD3Q9BSH5 251 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-205ENST00000533464 HES4Q9HCC6 221 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF835Q9Y2P0 537 aa15.37■□□□□ 0.05
PHRF1-205ENST00000533464 ARL16Q0P5N6 197 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 TMEM230Q96A57 120 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 SAT2Q96F10 170 aaPredicted RBP15.36■□□□□ 0.05
PHRF1-205ENST00000533464 KLK13Q9UKR3 277 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 SF3B6Q9Y3B4 125 aaKnown RBP15.36■□□□□ 0.05
PHRF1-205ENST00000533464 A0A1W2PQM1 296 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 hADV38S2A0JD32 116 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 MPV17LQ2QL34 196 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 HFEQ30201 348 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 ETV3LQ6ZN32 361 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 CRIPAKQ8N1N5 446 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 OR6C3Q9NZP0 311 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 HS3ST3B1Q9Y662 390 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 IGKV1D-42A0A075B6H8 117 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 TMEM211Q6ICI0 200 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 PRR27Q6MZM9 219 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 SKA3Q8IX90 412 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 TMEM56Q96MV1 263 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 CA10Q9NS85 328 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 RTTNQ86VV8 2226 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 H3F3AP84243 136 aa15.36■□□□□ 0.05
PHRF1-205ENST00000533464 MAP1LC3B2A6NCE7 125 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 HAND1O96004 215 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 BTNL3Q6UXE8 466 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 FAM219AQ8IW50 185 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 MAP1LC3BQ9GZQ8 125 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 A0A1W2PP11 408 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 TGOLN2O43493 480 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 FSTP19883 344 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 PSG4Q00888 419 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 SLC25A40Q8TBP6 338 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF426Q9BUY5 554 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 ZNF320A2RRD8 509 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 G3V3Q6 166 aa15.35■□□□□ 0.05
PHRF1-205ENST00000533464 MS4A18H0YCH9 400 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms