RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TXNL4BQ9NX01 149 aaKnown RBP9.85□□□□□ -0.83
SSBP3-214ENST00000533209 GHRLQ9UBU3 117 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 NUP50Q9UKX7 468 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 STUB1Q9UNE7 303 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 IGHV3OR16-10A0A075B7F0 116 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 CENPVL3A0A0U1RRI6 287 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 M0R1W7 72 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 SLC17A2O00624 439 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 CSN2P05814 226 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 UBBP0CG47 229 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 SMIM18P0DKX4 95 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 VSIG8P0DPA2 414 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 MGMTP16455 207 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 CCL3L1P16619 93 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 CD36P16671 472 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 JUNBP17275 347 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-214ENST00000533209 HTR2CP28335 458 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 ERP29P30040 261 aaKnown RBP9.84□□□□□ -0.83
SSBP3-214ENST00000533209 DLX6P56179 175 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 P2RX3P56373 397 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 MEF2CQ06413 473 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-214ENST00000533209 TAF9Q16594 264 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 MPV17LQ2QL34 196 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 LINC00596Q86U02 117 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 C11orf42Q8N5U0 333 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 OR6M1Q8NGM8 313 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 TNFRSF14Q92956 283 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 MRPS24Q96EL2 167 aaKnown RBP9.84□□□□□ -0.83
SSBP3-214ENST00000533209 COQ2Q96H96 371 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 VCX3AQ9NNX9 186 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 SIRT7Q9NRC8 400 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 ZNF69Q9UC07 566 aa9.84□□□□□ -0.83
SSBP3-214ENST00000533209 MEX3AA1L020 520 aaKnown RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 HSPB6O14558 160 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 CRTAPO75718 401 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 OR7C1O76099 320 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 IFNA2P01563 188 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 PRTN3P24158 256 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 GADD45AP24522 165 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 MYL9P24844 172 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 GLIPR1P48060 266 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 DLX1P56177 255 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 QRFPP83859 136 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 AESQ08117 197 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 P2RY14Q15391 338 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 PAN3Q58A45 887 aaKnown RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 OR10K2Q6IF99 312 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 METAP1DQ6UB28 335 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 C9orf139Q6ZV77 190 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 NR2C2APQ86WQ0 139 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 BPIFB2Q8N4F0 458 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 SUMF2Q8NBJ7 301 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 C22orf15Q8WYQ4 148 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 LHX4Q969G2 390 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 FAM46BQ96A09 425 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 Q96M66 194 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 SELENOIQ9C0D9 397 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 KCNK15Q9H427 330 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 METTL8Q9H825 291 aaKnown RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 UNKLQ9H9P5 680 aaKnown RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 PLGRKTQ9HBL7 147 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 SSR3Q9UNL2 185 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 SOX21Q9Y651 276 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-214ENST00000533209 LINC00312Q9Y6C7 94 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 V9GY05 133 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 ATRQ13535 2644 aa9.83□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PPH5 198 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 hADV38S2A0JD32 116 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A10PA6NDY2 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A18PA6NE21 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A16PA6NEW6 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A20PA6NIJ5 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A8PA6NJQ4 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A7PA6NKC0 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 C17orf98A8MV24 154 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A22PA8MWA6 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A12PA8MX19 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A5PA8MXJ8 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A23PA8MXZ1 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 RNASEK-C17orf49H0YIS7 233 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 PDCD5O14737 125 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 BPNT1O95861 308 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 MPIG6BO95866 241 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A15PP0C7V4 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A13PP0C7W8 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A14PP0C7W9 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 FAM90A24PP0C7X0 464 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 ZNF728P0DKX0 622 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 RAB3BP20337 219 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 KCNJ3P48549 501 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 PSMD7P51665 324 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 OR10A3P58181 314 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 ERVFRD-1P60508 538 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 RPS27AP62979 156 aaKnown RBP9.82□□□□□ -0.84
SSBP3-214ENST00000533209 PRB3Q04118 309 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-214ENST00000533209 KLRD1Q13241 179 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 SCGB2A2Q13296 93 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 UNC119Q13432 240 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms