RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 OR8S1Q8NH09 359 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 RAB40AQ8WXH6 277 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 SLC25A38Q96DW6 304 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 SOSTQ9BQB4 213 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ADAT1Q9BUB4 502 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 RTL8AQ9BWD3 113 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ABCG5Q9H222 651 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 KCNK15Q9H427 330 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ELL3Q9HB65 397 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 MSL2Q9HCI7 577 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM106BQ9NUM4 274 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 AURKAIP1Q9NWT8 199 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 RAB22AQ9UL26 194 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZDHHC8Q9ULC8 765 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 IGHV2-70DA0A0C4DH43 119 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 A0A1B0GWJ7 208 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM14DPA8MWL7 114 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 MLNRO43193 412 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 ANGPTL7O43827 346 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 GPR137BO60478 399 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 CD55P08174 381 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 BTG1P62324 171 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 QRFPP83859 136 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZNF45Q02386 682 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 PAX2Q02962 417 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 MADCAM1Q13477 382 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 SPANXN2Q5MJ10 180 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 C11orf87Q6NUJ2 197 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR2W3Q7Z3T1 314 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZNF573Q86YE8 665 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 MUC20Q8N307 709 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 SPERTQ8NA61 448 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZSCAN4Q8NAM6 433 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR4M1Q8NGD0 313 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR10K1Q8NGX5 313 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 PTX4Q96A99 478 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 S100A16Q96FQ6 103 aaKnown RBP9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 S100A13Q99584 98 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 SSBP3Q9BWW4 388 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 METTL9Q9H1A3 318 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR51I2Q9H344 312 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 C16orf95Q9H693 158 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 HMG20AQ9NP66 347 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 RHBDL2Q9NX52 303 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 EXTL2Q9UBQ6 330 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 GHRLQ9UBU3 117 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 FBLN5Q9UBX5 448 aa9.33□□□□□ -0.92
TRAPPC4-213ENST00000533149 IGKV1-12A0A0C4DH73 117 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZSCAN5BA6NJL1 495 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 F5H5P2 479 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 J3QRK9 145 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 HTR3BO95264 441 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 MPIG6BO95866 241 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 IGKV1D-12P01611 117 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 GRPP07492 148 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 RAB6AP20340 208 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 TALDO1P37837 337 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 MDH2P40926 338 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 HAAOP46952 286 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 SLC22A6Q4U2R8 563 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 FAM76BQ5HYJ3 339 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 HAGHLQ6PII5 290 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 METAP1DQ6UB28 335 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 FAM131AQ6UXB0 335 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 SLC25A26Q70HW3 274 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 MKXQ8IYA7 352 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM104Q8NE00 496 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 PXT1Q8NFP0 134 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR2Z1Q8NG97 314 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR10AD1Q8NGE0 317 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 KCNG3Q8TAE7 436 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 WDR12Q9GZL7 423 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 ATG5Q9H1Y0 275 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 BANF2Q9H503 90 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 C14orf119Q9NWQ9 140 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 PLXNB1O43157 2135 aa9.32□□□□□ -0.92
TRAPPC4-213ENST00000533149 IGHV3-64DA0A0J9YX35 117 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 KIR2DS1A0A191URI9 304 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 A0A1W2PP11 408 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM210A6NLX4 147 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 J3QT63 122 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 GPR37O15354 613 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 SYNGR1O43759 233 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 CRTAPO75718 401 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 WNT2P09544 360 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 PPP5CP53041 499 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TNFAIP6P98066 277 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 MZT1Q08AG7 82 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 UNC119Q13432 240 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZMYND11Q15326 602 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 RSU1Q15404 277 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 OXLD1Q5BKU9 147 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 Q6ZTK2 550 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 WDR86Q86TI4 376 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 IZUMO1Q8IYV9 350 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 SAXO1Q8IYX7 474 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms