RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GPX5O75715 221 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 PAHP00439 452 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 RBP4P02753 201 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 CD1AP06126 327 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 ZNF44P15621 663 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 COX7A1P24310 79 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 CFPP27918 469 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 ERP29P30040 261 aaKnown RBP12.53□□□□□ -0.4
CPSF1-210ENST00000532935 BDKRB2P30411 391 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 OR3A4PP47883 348 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 SLC35A2P78381 396 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 MIDNQ504T8 468 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 DDI2Q5TDH0 399 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 Q6P435 159 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 ASCL4Q6XD76 172 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-210ENST00000532935 CHST4Q8NCG5 386 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 SGCDQ92629 289 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPSF1-210ENST00000532935 ZNF714Q96N38 554 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 OR14A2Q96R54 314 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 MND1Q9BWT6 205 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 DPAGT1Q9H3H5 408 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-210ENST00000532935 ZNRD1Q9P1U0 126 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 LINC00312Q9Y6C7 94 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 FBN3Q75N90 2809 aa12.52□□□□□ -0.4
CPSF1-210ENST00000532935 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 TRBV5-7A0A0A0MS05 114 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 A0A0G2JK05 382 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 DEGS1O15121 323 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 FSTP19883 344 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 ZNF93P35789 620 aaPredicted RBP12.52□□□□□ -0.41
CPSF1-210ENST00000532935 PTGFRP43088 359 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 P2RX3P56373 397 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 BDH1Q02338 343 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 RSU1Q15404 277 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 PRSS48Q7RTY5 328 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 SVOPQ8N4V2 548 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 DERL3Q96Q80 235 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 PPA2Q9H2U2 334 aa12.52□□□□□ -0.41
CPSF1-210ENST00000532935 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 SLC33A1O00400 549 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-210ENST00000532935 CDRT1O95170 752 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 CSN2P05814 226 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 IGHV1-8P0DP01 117 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 TGFBR2P37173 567 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 BEND2Q8NDZ0 799 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 Q8NFD4 153 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 C17orf50Q8WW18 174 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 DYRK2Q92630 601 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 AJUBAQ96IF1 538 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 OR5M11Q96RB7 305 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 ING4Q9UNL4 249 aa12.51□□□□□ -0.41
CPSF1-210ENST00000532935 LSM2Q9Y333 95 aaKnown RBP12.51□□□□□ -0.41
CPSF1-210ENST00000532935 UBE2J1Q9Y385 318 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-210ENST00000532935 FUOMA2VDF0 154 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 BTBD17A6NE02 478 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 RGS10O43665 173 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 HTR3BO95264 441 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 CRYBA1P05813 215 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 AESQ08117 197 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 IRF3Q14653 427 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 SPHARQ15513 63 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 TAF9Q16594 264 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 PIGYQ3MUY2 71 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 TRAPPC6BQ86SZ2 158 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 SPARTQ8N0X7 666 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 OR13D1Q8NGV5 346 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 THRSPQ92748 146 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 DGCR14Q96DF8 476 aaKnown RBP12.5□□□□□ -0.41
CPSF1-210ENST00000532935 COQ2Q96H96 371 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 S100A13Q99584 98 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 C1RLQ9NZP8 487 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 FOXJ3Q9UPW0 622 aa12.5□□□□□ -0.41
CPSF1-210ENST00000532935 TRGV10A0A0A0MS01 117 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 TRAV24A0A0B4J272 114 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 ODAMA1E959 279 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 ZNF701M0R085 212 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-210ENST00000532935 PIN1P1O15428 100 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 GPR137BO60478 399 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 CLPXO76031 633 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 OMGP23515 440 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 MAPK3P27361 379 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-210ENST00000532935 GLIPR1P48060 266 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 LGALS4P56470 323 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 RPL15P61313 204 aaKnown RBP12.49□□□□□ -0.41
CPSF1-210ENST00000532935 ATXN7L3Q14CW9 347 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-210ENST00000532935 MED22Q15528 200 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 KRBOX4Q5JUW0 171 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 GPR141Q7Z602 305 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 FCGR1BQ92637 280 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms