RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MEGF9Q9H1U4 602 aa18.7■□□□□ 0.58
CAPN1-222ENST00000532285 UBE2J1Q9Y385 318 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-222ENST00000532285 MMP24Q9Y5R2 645 aa18.7■□□□□ 0.58
CAPN1-222ENST00000532285 A0A1B0GUS0 222 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 H0YHG0 523 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 SLC33A1O00400 549 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-222ENST00000532285 NDUFA7O95182 113 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 CSN2P05814 226 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 RAG2P55895 527 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 BDH1Q02338 343 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 Q8NFD4 153 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 OR51T1Q8NGJ9 327 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 C17orf50Q8WW18 174 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 ORAI1Q96D31 301 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 NR1H4Q96RI1 486 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-222ENST00000532285 MND1Q9BWT6 205 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 PPA2Q9H2U2 334 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 VPREB3Q9UKI3 123 aa18.69■□□□□ 0.58
CAPN1-222ENST00000532285 TRBV5-7A0A0A0MS05 114 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 FSTP19883 344 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 MDKP21741 143 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-222ENST00000532285 MYF6P23409 242 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 OR3A4PP47883 348 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 IL13RA2Q14627 380 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 TRAPPC6BQ86SZ2 158 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 OR14A2Q96R54 314 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 S100A13Q99584 98 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 CDCA4Q9BXL8 241 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 METTL9Q9H1A3 318 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 BEX1Q9HBH7 125 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 ING4Q9UNL4 249 aa18.68■□□□□ 0.58
CAPN1-222ENST00000532285 TRGV10A0A0A0MS01 117 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 HTR3BO95264 441 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 TGFBR2P37173 567 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 RELBQ01201 579 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 AESQ08117 197 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 AANATQ16613 207 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 SHISA2Q6UWI4 295 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 OR11H6Q8NGC7 330 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 OR10K1Q8NGX5 313 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 THRSPQ92748 146 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 CORO2AQ92828 525 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 ZNF184Q99676 751 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-222ENST00000532285 SSX3Q99909 188 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 ANKRD60Q9BZ19 345 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 GAL3ST2Q9H3Q3 398 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 PAK1IP1Q9NWT1 392 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-222ENST00000532285 IL36GQ9NZH8 169 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 FOXJ3Q9UPW0 622 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 TPRKBQ9Y3C4 175 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 SESN1Q9Y6P5 492 aa18.67■□□□□ 0.58
CAPN1-222ENST00000532285 TRAV8-7A0A075B6U6 113 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 FAM90A8PA6NJQ4 464 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 ODF3BA8MYP8 253 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 CLPXO76031 633 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 CDRT1O95170 752 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 ARG1P05089 322 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 GLIPR1P48060 266 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 HSPA13P48723 471 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 DOC2BQ14184 412 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 KRBOX4Q5JUW0 171 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 ZNF626Q68DY1 528 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 DERL3Q96Q80 235 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 NKX3-1Q99801 234 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-222ENST00000532285 PCDHB16Q9NRJ7 776 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 TAS2R3Q9NYW6 316 aa18.66■□□□□ 0.58
CAPN1-222ENST00000532285 TBL2Q9Y4P3 447 aaKnown RBP18.66■□□□□ 0.58
CAPN1-222ENST00000532285 A0A1W2PPK0 400 aa18.65■□□□□ 0.58
CAPN1-222ENST00000532285 ODAMA1E959 279 aa18.65■□□□□ 0.58
CAPN1-222ENST00000532285 CSTBP04080 98 aaKnown RBP18.65■□□□□ 0.58
CAPN1-222ENST00000532285 SLC35A2P78381 396 aa18.65■□□□□ 0.58
CAPN1-222ENST00000532285 LRRC75BQ2VPJ9 315 aa18.65■□□□□ 0.58
CAPN1-222ENST00000532285 COQ2Q96H96 371 aa18.65■□□□□ 0.58
CAPN1-222ENST00000532285 TRAV24A0A0B4J272 114 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 H3BUX3 64 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 ZNF780AO75290 641 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 MAPK3P27361 379 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 ATXN7L3Q14CW9 347 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 SPHARQ15513 63 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 PIGYQ3MUY2 71 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 PAN3Q58A45 887 aaKnown RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 NHLRC3Q5JS37 347 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 DHRS7BQ6IAN0 325 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 IZUMO2Q6UXV1 221 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 LHFPL4Q7Z7J7 247 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 CDH26Q8IXH8 852 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 OSR2Q8N2R0 312 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 FOXRED1Q96CU9 486 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 MALSU1Q96EH3 234 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 SLITRK2Q9H156 845 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 TMEM133Q9H2Q1 129 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 ST3GAL6Q9Y274 331 aa18.64■□□□□ 0.57
CAPN1-222ENST00000532285 LSM2Q9Y333 95 aaKnown RBP18.64■□□□□ 0.57
CAPN1-222ENST00000532285 MAGEA13PA6NCF6 341 aa18.63■□□□□ 0.57
CAPN1-222ENST00000532285 RBM11P57052 281 aaKnown RBP18.63■□□□□ 0.57
CAPN1-222ENST00000532285 DYNC1I2Q13409 638 aaKnown RBP18.63■□□□□ 0.57
CAPN1-222ENST00000532285 OLFML2AQ68BL7 652 aa18.63■□□□□ 0.57
CAPN1-222ENST00000532285 OR52W1Q6IF63 320 aa18.63■□□□□ 0.57
CAPN1-222ENST00000532285 HEPN1Q6WQI6 88 aa18.63■□□□□ 0.57
CAPN1-222ENST00000532285 MS4A15Q8N5U1 240 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms