RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 MT-ND2P03891 347 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 HTR1AP08908 422 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 PF4V1P10720 104 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 CEACAM3P40198 252 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 CCR9P51686 369 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 LOXL3P58215 753 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 CD83Q01151 205 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 CHST4Q8NCG5 386 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 TRUB1Q8WWH5 349 aaKnown RBP12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 CORO2AQ92828 525 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 RFT1Q96AA3 541 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 CREB3L1Q96BA8 519 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 COMMD4Q9H0A8 199 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 AURKAIP1Q9NWT8 199 aaPredicted RBP12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 ORC6Q9Y5N6 252 aa12.16□□□□□ -0.46
DEPDC7-204ENST00000532078 IGKV1-12A0A0C4DH73 117 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 LEUTXA8MZ59 168 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 DYNC1I1O14576 645 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 KDM4BO94953 1096 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 IGKV1D-12P01611 117 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 IGLV1-47P01700 117 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 CSN2P05814 226 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 ZNF44P15621 663 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 CD34P28906 385 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 PTGFRP43088 359 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 NANOS3P60323 173 aaKnown RBP12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 KPNB1Q14974 876 aaKnown RBP12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 SAXO1Q8IYX7 474 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 OR4D6Q8NGJ1 314 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 OR13C9Q8NGT0 318 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 STMN2Q93045 179 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 RNFT2Q96EX2 444 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 SLC25A33Q9BSK2 321 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 ZNF281Q9Y2X9 895 aa12.15□□□□□ -0.46
DEPDC7-204ENST00000532078 ODAMA1E959 279 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 J3QRE1 110 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 TOR1AO14656 332 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 CIB2O75838 187 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 ATP5HO75947 161 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 OR2F2O95006 317 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 PF4P02776 101 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 CD24P25063 80 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 LMO1P25800 156 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 GLIPR1P48060 266 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 AESQ08117 197 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 MEDAGQ5VYS4 303 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 CCDC144NLQ6NUI1 221 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 BAIAP2L2Q6UXY1 529 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 CENPVQ7Z7K6 275 aaPredicted RBP12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 OR4X2Q8NGF9 303 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 OR51A4Q8NGJ6 313 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 OR5D18Q8NGL1 313 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 OR10AC1Q8NH08 325 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 RBM14Q96PK6 669 aaKnown RBP12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 SPACA5Q96QH8 159 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 MYCBPQ99417 103 aaPredicted RBP12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 ZNF286AQ9HBT8 521 aa12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
DEPDC7-204ENST00000532078 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 SNTNA6NMZ2 147 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 OR4C45A6NMZ5 311 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 M0QZK8 103 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 LPLP06858 475 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 PRRX1P54821 245 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 SNRPGP62308 76 aaKnown RBP12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 SLC35A2P78381 396 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 SCN1BQ07699 218 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 ABCA11PQ4W5N1 156 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 KRBOX4Q5JUW0 171 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 TPTE2P1Q5T6R2 138 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 CCDC121Q6ZUS5 278 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 ACBD7Q8N6N7 88 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 WFDC9Q8NEX5 89 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 HRASLS5Q96KN8 279 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 C4orf36Q96KX1 117 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 ZCCHC4Q9H5U6 513 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 OR6C3Q9NZP0 311 aa12.13□□□□□ -0.47
DEPDC7-204ENST00000532078 A0A087X0M5 115 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 A0A1B0GX30 115 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 OOSP1A8MZH6 123 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 BUB1B-PAK6H3BSN5 160 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 J3QLW9 94 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 SLC33A1O00400 549 aaPredicted RBP12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 ALPLP05186 524 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 HCKP08631 526 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 RPSAP08865 295 aaKnown RBP12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 IGLL1P15814 213 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 ZNF19P17023 458 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 GDNFP39905 211 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 MNDAP41218 407 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 OR3A4PP47883 348 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms