RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PLGRKTQ9HBL7 147 aa17.12■□□□□ 0.33
CCS-207ENST00000531990 STUB1Q9UNE7 303 aa17.12■□□□□ 0.33
CCS-207ENST00000531990 AK6Q9Y3D8 172 aaKnown RBP17.12■□□□□ 0.33
CCS-207ENST00000531990 MXRA5Q9NR99 2828 aa17.12■□□□□ 0.33
CCS-207ENST00000531990 IGHV3OR16-10A0A075B7F0 116 aa17.11■□□□□ 0.33
CCS-207ENST00000531990 hADV38S2A0JD32 116 aa17.11■□□□□ 0.33
CCS-207ENST00000531990 PDCD5O14737 125 aa17.11■□□□□ 0.33
CCS-207ENST00000531990 CRTAPO75718 401 aaPredicted RBP17.11■□□□□ 0.33
CCS-207ENST00000531990 OR7C1O76099 320 aaPredicted RBP17.11■□□□□ 0.33
CCS-207ENST00000531990 IGHV4-38-2P0DP08 117 aa17.11■□□□□ 0.33
CCS-207ENST00000531990 HTR2CP28335 458 aa17.11■□□□□ 0.33
CCS-207ENST00000531990 ERP29P30040 261 aaKnown RBP17.11■□□□□ 0.33
CCS-207ENST00000531990 PAN3Q58A45 887 aaKnown RBP17.11■□□□□ 0.33
CCS-207ENST00000531990 METTL8Q9H825 291 aaKnown RBP17.11■□□□□ 0.33
CCS-207ENST00000531990 SSR3Q9UNL2 185 aa17.11■□□□□ 0.33
CCS-207ENST00000531990 DSCAML1Q8TD84 2053 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 TRAV1-2A0A0B4J238 106 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 A0A1W2PP11 408 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 CSN2P05814 226 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 MGMTP16455 207 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 P2RX3P56373 397 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 BPIFB3P59826 476 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 MPV17LQ2QL34 196 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 C22orf42Q6IC83 251 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 LHX4Q969G2 390 aa17.1■□□□□ 0.33
CCS-207ENST00000531990 HSPB6O14558 160 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 GEMIN2O14893 280 aaKnown RBP17.09■□□□□ 0.33
CCS-207ENST00000531990 SLC22A1O15245 554 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 CD37P11049 281 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 FGF9P31371 208 aaPredicted RBP17.09■□□□□ 0.33
CCS-207ENST00000531990 KCNJ3P48549 501 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 TAF9Q16594 264 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 NCR3LG1Q68D85 454 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 TRAPPC6BQ86SZ2 158 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 Q8N7P7 452 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 ZNF418Q8TF45 676 aaPredicted RBP17.09■□□□□ 0.33
CCS-207ENST00000531990 C1orf147Q96MC9 270 aaPredicted RBP17.09■□□□□ 0.33
CCS-207ENST00000531990 SELENOIQ9C0D9 397 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 BANF2Q9H503 90 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 IFT22Q9H7X7 185 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 SIRT7Q9NRC8 400 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 ZNF69Q9UC07 566 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 LINC00312Q9Y6C7 94 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 V9GY05 133 aa17.09■□□□□ 0.33
CCS-207ENST00000531990 TRAV24A0A0B4J272 114 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 H3BUI4 141 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 SLC17A2O00624 439 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 ZNF728P0DKX0 622 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 CD36P16671 472 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 PRTN3P24158 256 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 GUCA2AQ02747 115 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 AESQ08117 197 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 ZNF273Q14593 569 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 ATXN7L3Q14CW9 347 aaPredicted RBP17.08■□□□□ 0.32
CCS-207ENST00000531990 RAB11BQ15907 218 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 KRBOX4Q5JUW0 171 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 ATAD3CQ5T2N8 411 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 PRIMA1Q86XR5 153 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 TPRX1Q8N7U7 411 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 KCNG3Q8TAE7 436 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 C22orf15Q8WYQ4 148 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 FAM46BQ96A09 425 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 ZNF714Q96N38 554 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 SUCNR1Q9BXA5 334 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 BARHL1Q9BZE3 327 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 SPACA1Q9HBV2 294 aa17.08■□□□□ 0.32
CCS-207ENST00000531990 TXNL4BQ9NX01 149 aaKnown RBP17.08■□□□□ 0.32
CCS-207ENST00000531990 TRGV10A0A0A0MS01 117 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 CENPVL3A0A0U1RRI6 287 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A10PA6NDY2 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A18PA6NE21 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A16PA6NEW6 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A20PA6NIJ5 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A8PA6NJQ4 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A7PA6NKC0 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A22PA8MWA6 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A12PA8MX19 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A5PA8MXJ8 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A23PA8MXZ1 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 TCF21O43680 179 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 BPNT1O95861 308 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A15PP0C7V4 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A13PP0C7W8 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A14PP0C7W9 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 FAM90A24PP0C7X0 464 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 CCL3L1P16619 93 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 METAP1DQ6UB28 335 aaPredicted RBP17.07■□□□□ 0.32
CCS-207ENST00000531990 RBMS3Q6XE24 437 aaKnown RBP17.07■□□□□ 0.32
CCS-207ENST00000531990 SUMF2Q8NBJ7 301 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 TMEM104Q8NE00 496 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 NEK7Q8TDX7 302 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 GFI1Q99684 422 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 SLC6A7Q99884 636 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 DPCDQ9BVM2 203 aaPredicted RBP17.07■□□□□ 0.32
CCS-207ENST00000531990 UNKLQ9H9P5 680 aaKnown RBP17.07■□□□□ 0.32
CCS-207ENST00000531990 ING3Q9NXR8 418 aa17.07■□□□□ 0.32
CCS-207ENST00000531990 IGHV1-69DA0A0B4J2H0 117 aa17.06■□□□□ 0.32
CCS-207ENST00000531990 MPIG6BO95866 241 aa17.06■□□□□ 0.32
CCS-207ENST00000531990 IGHV1-69P01742 117 aa17.06■□□□□ 0.32
CCS-207ENST00000531990 VSIG8P0DPA2 414 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms