RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SCGB1D2O95969 90 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 APLNRP35414 380 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 P2RY1P47900 373 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 CAV2P51636 162 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 LDLRAD3Q86YD5 345 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 FAM219AQ8IW50 185 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 OR4A4PQ8NGN8 299 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 NANOS1Q8WY41 292 aaKnown RBP14.77□□□□□ -0.04
BRCA2-204ENST00000530893 MTCH1Q9NZJ7 389 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 POMT1Q9Y6A1 747 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 C3orf85A0A1B0GTC6 90 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 ANKRD30BLA7E2S9 258 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 TRIM77I1YAP6 450 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 MPPED1O15442 326 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 ST8SIA3O43173 380 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 GPR137BO60478 399 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 CDS2O95674 445 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 NUFIP2Q7Z417 695 aaKnown RBP14.76□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF573Q86YE8 665 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 OR5P3Q8WZ94 311 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 SEC11CQ9BY50 192 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 ARV1Q9H2C2 271 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 J3QW42 95 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 MED6O75586 246 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 GLAP06280 429 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 KCNJ3P48549 501 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 CLN3Q13286 438 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 IGSF11Q5DX21 431 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 HES3Q5TGS1 186 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 FBXW12Q6X9E4 464 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 OR11L1Q8NGX0 322 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 TMEM222Q9H0R3 208 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 RHOFQ9HBH0 211 aa14.76□□□□□ -0.05
BRCA2-204ENST00000530893 BORCS7-ASMTA0A0B4J1R7 106 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 F8W036 122 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 NGFP01138 241 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 RCC1P18754 421 aaPredicted RBP14.75□□□□□ -0.05
BRCA2-204ENST00000530893 GNRHRP30968 328 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 F2RL1P55085 397 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 FBXW9Q5XUX1 488 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 DHRS13Q6UX07 377 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 IL22RA1Q8N6P7 574 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 OR1K1Q8NGR3 316 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 TMEM56Q96MV1 263 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 HRH4Q9H3N8 390 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF552Q9H707 407 aaPredicted RBP14.75□□□□□ -0.05
BRCA2-204ENST00000530893 UQCC1Q9NVA1 299 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 ATP23Q9Y6H3 246 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 TMEM56-RWDD3S4R434 201 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 FREM2Q5SZK8 3169 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 TRBV6-6A0A0A6YYG2 114 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 DUXBA0A1W2PPF3 345 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 TRDCB7Z8K6 153 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 ADCYAP1P18509 176 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 GNG3P63215 75 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 CLRN3Q8NCR9 226 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 OR4D5Q8NGN0 318 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 TP53RKQ96S44 253 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 SPIN2AQ99865 258 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 SPIN2BQ9BPZ2 258 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 FAM212BQ9NTI7 297 aaPredicted RBP14.75□□□□□ -0.05
BRCA2-204ENST00000530893 CRIM1Q9NZV1 1036 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 SHANK1Q9Y566 2161 aa14.75□□□□□ -0.05
BRCA2-204ENST00000530893 ARHGAP21Q5T5U3 1957 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 TUSC2O75896 110 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 SEC11BP0C7V7 166 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 IL32P24001 234 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 AKR1C2P52895 323 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 AKR1C1Q04828 323 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 IL24Q13007 206 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 SLC35G3Q8N808 338 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF565Q8N9K5 539 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 LYPD6BQ8NI32 183 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 ABHD14BQ96IU4 210 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 PKIBQ9C010 78 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 TREM1Q9NP99 234 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 PURGQ9UJV8 347 aaKnown RBP14.74□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF175Q9Y473 711 aa14.74□□□□□ -0.05
BRCA2-204ENST00000530893 PIGBOS1A0A0B4J2F0 54 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 GPR31O00270 319 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 TOR1AO14656 332 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 SIGLEC5O15389 551 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 NUPL2O15504 423 aaKnown RBP14.73□□□□□ -0.05
BRCA2-204ENST00000530893 SNAPINO95295 136 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 IL18BPO95998 194 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 LPAR6P43657 344 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 SOX8P57073 446 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 GNMTQ14749 295 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF169Q14929 603 aaPredicted RBP14.73□□□□□ -0.05
BRCA2-204ENST00000530893 SWI5Q1ZZU3 235 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 BTNL8Q6UX41 500 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.73□□□□□ -0.05
BRCA2-204ENST00000530893 PUSL1Q8N0Z8 303 aaKnown RBP14.73□□□□□ -0.05
BRCA2-204ENST00000530893 TMEM178AQ8NBL3 297 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 BCL2L2Q92843 193 aaPredicted RBP14.73□□□□□ -0.05
BRCA2-204ENST00000530893 WDYHV1Q96HA8 205 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 IFT22Q9H7X7 185 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 TMEM9BQ9NQ34 198 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 PRSS50Q9UI38 385 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 TRGV5A0A0B4J1U4 118 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms