RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 HSBP1L1C9JCN9 74 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 B3GALT2O43825 422 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 PITX3O75364 302 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 HRASP01112 189 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 TMEM225BP0DP42 221 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 TMEM252Q8N6L7 170 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 SLC24A4Q8NFF2 622 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 IGLV1-36A0A0B4J1U3 117 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 BLVRBP30043 206 aaPredicted RBP12.3□□□□□ -0.44
PCF11-204ENST00000530660 RANP62826 216 aaKnown RBP12.3□□□□□ -0.44
PCF11-204ENST00000530660 ACKR1Q16570 336 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
PCF11-204ENST00000530660 OR5D14Q8NGL3 314 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 NUDT16L1Q9BRJ7 211 aaKnown RBP12.3□□□□□ -0.44
PCF11-204ENST00000530660 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
PCF11-204ENST00000530660 SERINC4A6NH21 518 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 ZNF732B4DXR9 585 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 LILRB3O75022 631 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 TTRP02766 147 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 HINT1P49773 126 aaPredicted RBP12.29□□□□□ -0.44
PCF11-204ENST00000530660 RPL23P62829 140 aaKnown RBP12.29□□□□□ -0.44
PCF11-204ENST00000530660 ZNF77Q15935 545 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 FBXO42Q6P3S6 717 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 TMPRSS7Q7RTY8 843 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 MYPOPQ86VE0 399 aaPredicted RBP12.29□□□□□ -0.44
PCF11-204ENST00000530660 SAXO1Q8IYX7 474 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 ATG2BQ96BY7 2078 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 CDS2O95674 445 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 ZNF154Q13106 437 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 HNRNPA1L2Q32P51 320 aaKnown RBP12.29□□□□□ -0.44
PCF11-204ENST00000530660 ABCA11PQ4W5N1 156 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 LINC01551Q86U37 167 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 GPER1Q99527 375 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 RAB11FIP5Q9BXF6 653 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 NAA60Q9H7X0 242 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
PCF11-204ENST00000530660 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 C17orf105B2RV13 164 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 FBLN7Q53RD9 439 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 ODF3L1Q8IXM7 274 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 APH1AQ96BI3 265 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 RNF186Q9NXI6 227 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 MCTS1Q9ULC4 181 aaKnown RBP12.29□□□□□ -0.44
PCF11-204ENST00000530660 TRAPPC1Q9Y5R8 145 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
PCF11-204ENST00000530660 NKX2-6A6NCS4 301 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 TCN2P20062 427 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 ELAVL3Q14576 367 aaKnown RBP12.28□□□□□ -0.44
PCF11-204ENST00000530660 CD226Q15762 336 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 C1QL2Q7Z5L3 287 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
PCF11-204ENST00000530660 GNPNAT1Q96EK6 184 aaPredicted RBP12.28□□□□□ -0.44
PCF11-204ENST00000530660 C18orf12Q96KH6 178 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 OR51I2Q9H344 312 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 ELL3Q9HB65 397 aaPredicted RBP12.28□□□□□ -0.44
PCF11-204ENST00000530660 FBLN5Q9UBX5 448 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 RBM7Q9Y580 266 aaKnown RBP12.28□□□□□ -0.44
PCF11-204ENST00000530660 HEBP2Q9Y5Z4 205 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 COX11Q9Y6N1 276 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 A0A0U1RQV5 110 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 FOXS1O43638 330 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 WISP1O95388 367 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 IL33O95760 270 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 GPR75O95800 540 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 TOMM40O96008 361 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 RRADP55042 308 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 TMEM41BQ5BJD5 291 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 Q6ZN92 141 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 COMMD2Q86X83 199 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 ZNF440Q8IYI8 595 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 LRRC3BQ96PB8 259 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 TXN2Q99757 166 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 FAM60AQ9NP50 221 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
PCF11-204ENST00000530660 TMEM50AO95807 157 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 ZNF141Q15928 474 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 ZNF726P1Q15940 193 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 CXorf66Q5JRM2 361 aaPredicted RBP12.27□□□□□ -0.44
PCF11-204ENST00000530660 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 TCF23Q7RTU1 214 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 CISD2Q8N5K1 135 aaKnown RBP12.27□□□□□ -0.44
PCF11-204ENST00000530660 OR4D5Q8NGN0 318 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 RSG1Q9BU20 258 aa12.27□□□□□ -0.44
PCF11-204ENST00000530660 TRAV39A0A0B4J263 110 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 C17orf51A8MQB3 221 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 F6UZH7 168 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 COMPP49747 757 aaPredicted RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 FMODQ06828 376 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms