RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CYS1Q717R9 158 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 LYPD6Q86Y78 171 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 ZNF695Q8IW36 515 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 ZNF440Q8IYI8 595 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 OR8G5Q8NG78 346 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 OR5P2Q8WZ92 322 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 MRPL13Q9BYD1 178 aaKnown RBP5.08□□□□□ -1.6
SVIP-204ENST00000530199 RIBC2Q9H4K1 309 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 KAT8Q9H7Z6 458 aaKnown RBP5.08□□□□□ -1.6
SVIP-204ENST00000530199 CENPMQ9NSP4 180 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 ATP6V1HQ9UI12 483 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 PRPF19Q9UMS4 504 aaKnown RBP5.08□□□□□ -1.6
SVIP-204ENST00000530199 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 IGLV4-3A0A075B6K6 122 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 A0A087WUJ7 227 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 F5H5P2 479 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 SOCS3O14543 225 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 EI24O14681 340 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 ZNF32P17041 273 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 GRPRP30550 384 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 PTGFRP43088 359 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 RAB13P51153 203 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 RAB25P57735 213 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 PSG4Q00888 419 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 MAB21L1Q13394 359 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 CCDC137Q6PK04 289 aaKnown RBP5.07□□□□□ -1.6
SVIP-204ENST00000530199 CEMP1Q6PRD7 247 aaPredicted RBP5.07□□□□□ -1.6
SVIP-204ENST00000530199 ATRAIDQ6UW56 229 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 C16orf62Q7Z3J2 963 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 ZNF429Q86V71 674 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 SAMD12Q8N8I0 201 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 FBXO36Q8NEA4 188 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 OR5D13Q8NGL4 314 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 OR8U1Q8NH10 309 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 OR6X1Q8NH79 312 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 MIPOL1Q8TD10 442 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 DLX4Q92988 240 aaPredicted RBP5.07□□□□□ -1.6
SVIP-204ENST00000530199 MAGOHBQ96A72 148 aaKnown RBP5.07□□□□□ -1.6
SVIP-204ENST00000530199 FCRL1Q96LA6 429 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 CCT7Q99832 543 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 ATF6BQ99941 703 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 TPPP3Q9BW30 176 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 SP140LQ9H930 580 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 MBD2Q9UBB5 411 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 FBXO7Q9Y3I1 522 aa5.07□□□□□ -1.6
SVIP-204ENST00000530199 IGHV3-64DA0A0J9YX35 117 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 PSMB11A5LHX3 300 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 FAM159BA6NKW6 160 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 E7ESA3 106 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 SMIM24O75264 130 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 GYPAP02724 150 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 KRT8P05787 483 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 RBP1P09455 135 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 SPNP16150 400 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 UCP1P25874 307 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 GGT2P36268 569 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 CD200P41217 278 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 ERFP50548 548 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 COPZ1P61923 177 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 FUT5Q11128 374 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 EXOSC2Q13868 293 aaKnown RBP5.06□□□□□ -1.6
SVIP-204ENST00000530199 KIR2DS1Q14954 304 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 ANKDD1AQ495B1 522 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 TEX36Q5VZQ5 186 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 DMKNQ6E0U4 476 aaPredicted RBP5.06□□□□□ -1.6
SVIP-204ENST00000530199 ZNF613Q6PF04 617 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 GPRIN3Q6ZVF9 776 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 DYNAPQ8N1N2 210 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 CENPSQ8N2Z9 138 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 FGFRL1Q8N441 504 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 LRRC18Q8N456 261 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 AKR7LQ8NHP1 331 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 SLC38A4Q969I6 547 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 TSSK3Q96PN8 268 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 ECSITQ9BQ95 431 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 WDR76Q9H967 626 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 SIAEQ9HAT2 523 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 CCNB1IP1Q9NPC3 277 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 ABCB10Q9NRK6 738 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 MGAT4AQ9UM21 535 aa5.06□□□□□ -1.6
SVIP-204ENST00000530199 KLK5Q9Y337 293 aaPredicted RBP5.06□□□□□ -1.6
SVIP-204ENST00000530199 IMPA2O14732 288 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 NQO1P15559 274 aaKnown RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 RPS4Y1P22090 263 aaKnown RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 SOX6P35712 828 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 GSK3BP49841 420 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 ZNF133P52736 654 aaPredicted RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 RIDAP52758 137 aaKnown RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 BIDP55957 195 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 PUDPQ08623 228 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 PDIA2Q13087 525 aaKnown RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 NAB1Q13506 487 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 GNA13Q14344 377 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 OR8B8Q15620 311 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 HIST3H3Q16695 136 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 IMPG1Q17R60 797 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 MRPL2Q5T653 305 aaKnown RBP5.05□□□□□ -1.6
SVIP-204ENST00000530199 ATAD3BQ5T9A4 648 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 ZC2HC1BQ5TFG8 222 aa5.05□□□□□ -1.6
SVIP-204ENST00000530199 ZNF562Q6V9R5 426 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms