RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 ZNF205O95201 554 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 ZNF250P15622 560 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 ECI1P42126 302 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 SUPT4H1P63272 117 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 LRP11Q86VZ4 500 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 C11orf53Q8IXP5 236 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 OR5M8Q8NGP6 311 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 RDH5Q92781 318 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 TLNRD1Q9H1K6 362 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 Q9N2K0 584 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 POLEQ07864 2286 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 ATRXP46100 2492 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 NXPH2O95156 264 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 GLAP06280 429 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 ACAA1P09110 424 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 PGAM2P15259 253 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 GLRXP35754 106 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 SPERTQ8NA61 448 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 GTF3AQ92664 365 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 DPCDQ9BVM2 203 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 SLA2Q9H6Q3 261 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
CCDC90B-213ENST00000529611 PLCE1Q9P212 2302 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 C16orf97H3BN30 126 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 DEGS1O15121 323 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 NOS1APO75052 506 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF44P15621 663 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 RPS2P15880 293 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 HLA-GP17693 338 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 GMFBP60983 142 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 KLRB1Q12918 225 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 PRAMEF6Q5VXH4 476 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 LPCAT3Q6P1A2 487 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 CLEC18BQ6UXF7 455 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF826PQ6ZT77 177 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 POC1AQ8NBT0 407 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 ASB13Q8WXK3 278 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 GON7Q9BXV9 100 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 HES4Q9HCC6 221 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 DUSP13Q9UII6 198 aa13.08□□□□□ -0.32
CCDC90B-213ENST00000529611 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 ATP6V1G2-DDX39BF2Z307 99 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 CCSO14618 274 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 RGS11O94810 467 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 SFT2D2O95562 160 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 RBM39Q14498 530 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF146Q15072 292 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 LGALSLQ3ZCW2 172 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 IGSF11Q5DX21 431 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 MRPL30Q8TCC3 161 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 TMEM171Q8WVE6 324 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 DMRTA2Q96SC8 542 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 DHRS9Q9BPW9 319 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 C14orf166Q9Y224 244 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 OR2H2O95918 312 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 CTSDP07339 412 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 CD40P25942 277 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 FCGR2CP31995 323 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 SRSF4Q08170 494 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 WDR82Q6UXN9 313 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 USB1Q9BQ65 265 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 VKORC1Q9BQB6 163 aa13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 RIMS4Q9H426 269 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-213ENST00000529611 TRBV6-6A0A0A6YYG2 114 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 PLSCR5A0PG75 271 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 A6NLC8 198 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 SLC33A1O00400 549 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 SLC34A2O95436 690 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 KNG1P01042 644 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 ID4P47928 161 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 KLF3P57682 345 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 SLC9A3R2Q15599 337 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 SPIN3Q5JUX0 258 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 KCTD9Q7L273 389 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 RND1Q92730 232 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 TOMM40LQ969M1 308 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 UFSP2Q9NUQ7 469 aa13.06□□□□□ -0.32
CCDC90B-213ENST00000529611 IGLV3-9A0A075B6K5 115 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 SIRPB1O00241 398 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 WNT9BO14905 357 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 SCTP09683 121 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 GLP1RP43220 463 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 FXYD4P59646 89 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 HOXA4Q00056 320 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 PAN3Q58A45 887 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF880Q6PDB4 577 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 VHLLQ6RSH7 139 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 OR2Z1Q8NG97 314 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 MOB3AQ96BX8 217 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 SYT3Q9BQG1 590 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 CLEC4MQ9H2X3 399 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 TMEM165Q9HC07 324 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms