RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 MINOS1Q5TGZ0 78 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF782Q6ZMW2 699 aaPredicted RBP8.46□□□□□ -1.06
CPSF1-203ENST00000527916 TCF23Q7RTU1 214 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 OR10AC1Q8NH08 325 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 OR5AK2Q8NH90 309 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 CORO2AQ92828 525 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 JAM3Q9BX67 310 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 ISG20L2Q9H9L3 353 aaKnown RBP8.46□□□□□ -1.06
CPSF1-203ENST00000527916 FGF20Q9NP95 211 aaPredicted RBP8.46□□□□□ -1.06
CPSF1-203ENST00000527916 AASSQ9UDR5 926 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 PCDHGB5Q9Y5G0 923 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 MINOS1-NBL1R4GNA1 71 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
CPSF1-203ENST00000527916 IGKV1-12A0A0C4DH73 117 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 INMTO95050 263 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 ZFPL1O95159 310 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 IGKV1D-12P01611 117 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 ARG1P05089 322 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 CSN2P05814 226 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 PRKACAP17612 351 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 GABRR1P24046 479 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 GBX2P52951 348 aaPredicted RBP8.45□□□□□ -1.06
CPSF1-203ENST00000527916 P2RX3P56373 397 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 CCDC58Q4VC31 144 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 OR52W1Q6IF63 320 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 RNF144BQ7Z419 303 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 LHFPL4Q7Z7J7 247 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 CHST4Q8NCG5 386 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 OR52I1Q8NGK6 324 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 OR13C9Q8NGT0 318 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 WIPF2Q8TF74 440 aaPredicted RBP8.45□□□□□ -1.06
CPSF1-203ENST00000527916 OR5M11Q96RB7 305 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 WNT10AQ9GZT5 417 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 TAS2R3Q9NYW6 316 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 IL36RNQ9UBH0 155 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 ZMAT5Q9UDW3 170 aaKnown RBP8.45□□□□□ -1.06
CPSF1-203ENST00000527916 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 SESN1Q9Y6P5 492 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 DNAH7Q8WXX0 4024 aa8.45□□□□□ -1.06
CPSF1-203ENST00000527916 IGHV2-26A0A0B4J1V2 119 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 E9PI62 339 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 SULT1B1O43704 296 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 OR2H2O95918 312 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 LIMS3P0CW19 117 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 LIMS4P0CW20 117 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 DUSP1P28562 367 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 HOXD3P31249 432 aaPredicted RBP8.44□□□□□ -1.06
CPSF1-203ENST00000527916 VDAC2P45880 294 aaPredicted RBP8.44□□□□□ -1.06
CPSF1-203ENST00000527916 OR3A1P47881 315 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 ZP1P60852 638 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 CD83Q01151 205 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 EDDM3AQ14507 147 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 KISS1Q15726 138 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 SSX2Q16385 188 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 ELP2Q6IA86 826 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 RTN4RL2Q86UN3 420 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 DYNAPQ8N1N2 210 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF555Q8NEP9 628 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 PXT1Q8NFP0 134 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 OR5AU1Q8NGC0 362 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 RPS4Y2Q8TD47 263 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 APH1BQ8WW43 257 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 CPNE2Q96FN4 548 aaPredicted RBP8.44□□□□□ -1.06
CPSF1-203ENST00000527916 CHST6Q9GZX3 395 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 TMEM133Q9H2Q1 129 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 NCOR1P1Q9H4R4 102 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 EXOSC4Q9NPD3 245 aaKnown RBP8.44□□□□□ -1.06
CPSF1-203ENST00000527916 C8orf4Q9NR00 106 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
CPSF1-203ENST00000527916 TCF19Q9Y242 345 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 GSTK1Q9Y2Q3 226 aa8.44□□□□□ -1.06
CPSF1-203ENST00000527916 TRGV10A0A0A0MS01 117 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 IRGMA1A4Y4 181 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 A6NDX4 124 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 FAM90A22PA8MWA6 464 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 H3BUI4 141 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 F2RL2O00254 374 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 WBP4O75554 376 aaKnown RBP8.43□□□□□ -1.06
CPSF1-203ENST00000527916 TMEM225BP0DP42 221 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 PAX6P26367 422 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 DCKP27707 260 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 MTNR1BP49286 362 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 DYNC1I2Q13409 638 aaKnown RBP8.43□□□□□ -1.06
CPSF1-203ENST00000527916 ZSCAN26Q16670 478 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 LDLRAD2Q5SZI1 272 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 Q6P435 159 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 RPL22L1Q6P5R6 122 aaKnown RBP8.43□□□□□ -1.06
CPSF1-203ENST00000527916 HEPN1Q6WQI6 88 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 TPRX1Q8N7U7 411 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 Q8NFD4 153 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 RFT1Q96AA3 541 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 SPACA5Q96QH8 159 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 PDCD1LG2Q9BQ51 273 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 CLEC7AQ9BXN2 247 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 GAL3ST2Q9H3Q3 398 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 ABCB10Q9NRK6 738 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms