RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 OR2S2Q9NQN1 319 aa13.16□□□□□ -0.3
USH1C-207ENST00000527720 MMP26Q9NRE1 261 aa13.16□□□□□ -0.3
USH1C-207ENST00000527720 TMED3Q9Y3Q3 217 aa13.16□□□□□ -0.3
USH1C-207ENST00000527720 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
USH1C-207ENST00000527720 ARGFXA6NJG6 315 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 ZNF205O95201 554 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 GLAP06280 429 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 CTXN2P0C2S0 81 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 WNT5AP41221 380 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 RND3P61587 244 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 GNG3P63215 75 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 TGIF1Q15583 401 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 OR5T2Q8NGG2 359 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 LSM5Q9Y4Y9 91 aaKnown RBP13.15□□□□□ -0.3
USH1C-207ENST00000527720 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
USH1C-207ENST00000527720 TK1P04183 234 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 IL24Q13007 206 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 IL13RA2Q14627 380 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 RPL7L1Q6DKI1 246 aaKnown RBP13.15□□□□□ -0.3
USH1C-207ENST00000527720 LHFPL5Q8TAF8 219 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 PKIBQ9C010 78 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 MS4A7Q9GZW8 240 aaPredicted RBP13.15□□□□□ -0.3
USH1C-207ENST00000527720 C12orf49Q9H741 205 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 GLRX2Q9NS18 164 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 ZNF629Q9UEG4 869 aaPredicted RBP13.15□□□□□ -0.3
USH1C-207ENST00000527720 AMDHD2Q9Y303 409 aa13.15□□□□□ -0.3
USH1C-207ENST00000527720 TRBV6-6A0A0A6YYG2 114 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 MPPED1O15442 326 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 KCNJ3P48549 501 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 HIKESHIQ53FT3 197 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 IGSF11Q5DX21 431 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 GPR157Q5UAW9 335 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 TMEM268Q5VZI3 342 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 OR2A2Q6IF42 318 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 GMPPAQ96IJ6 420 aaPredicted RBP13.14□□□□□ -0.31
USH1C-207ENST00000527720 C3orf85A0A1B0GTC6 90 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 TMEM218A2RU14 115 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
USH1C-207ENST00000527720 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
USH1C-207ENST00000527720 BATF2Q8N1L9 274 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 LRRC46Q96FV0 321 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
USH1C-207ENST00000527720 IFT22Q9H7X7 185 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
USH1C-207ENST00000527720 TRDCB7Z8K6 153 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 SYNGR1O43759 233 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 SCGB1D2O95969 90 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 PRKACAP17612 351 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 SULT1A2P50226 295 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 TNFSF10P50591 281 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 TMEM33P57088 247 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 ZNF273Q14593 569 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 TBC1D28Q2M2D7 210 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 RNFT1Q5M7Z0 435 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 HAGHLQ6PII5 290 aaPredicted RBP13.13□□□□□ -0.31
USH1C-207ENST00000527720 MDP1Q86V88 176 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 UBAC2Q8NBM4 344 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 TMEM222Q9H0R3 208 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 FBXL17Q9UF56 701 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 TUSC2O75896 110 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 CDS2O95674 445 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 GNRHRP30968 328 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 P2RY1P47900 373 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 PJVKQ0ZLH3 352 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 MST1LQ2TV78 715 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 PIP4P1Q86T03 277 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
USH1C-207ENST00000527720 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 CDRT15L2A8MXV6 281 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 GPR31O00270 319 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 GPR137BO60478 399 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 ATG12O94817 140 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
USH1C-207ENST00000527720 FBXW12Q6X9E4 464 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 ZNF565Q8N9K5 539 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
USH1C-207ENST00000527720 SLC34A2O95436 690 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 DEFA5Q01523 94 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 C10orf91Q5T1B1 145 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 PXDC1Q5TGL8 231 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 SUMF2Q8NBJ7 301 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 ARV1Q9H2C2 271 aa13.11□□□□□ -0.31
USH1C-207ENST00000527720 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms