RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
SMCO4-204ENST00000527149 CST11Q9H112 138 aa13.73□□□□□ -0.21
SMCO4-204ENST00000527149 PCDHB16Q9NRJ7 776 aa13.73□□□□□ -0.21
SMCO4-204ENST00000527149 C19orf12Q9NSK7 152 aa13.73□□□□□ -0.21
SMCO4-204ENST00000527149 STEAP1Q9UHE8 339 aa13.73□□□□□ -0.21
SMCO4-204ENST00000527149 GLS2Q9UI32 602 aa13.73□□□□□ -0.21
SMCO4-204ENST00000527149 A0A0A6YYD4 124 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 A0A0B4J203 849 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 NOTOA8MTQ0 251 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 INAFM1C9JVW0 142 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 DEGS1O15121 323 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 CRTAPO75718 401 aaPredicted RBP13.72□□□□□ -0.21
SMCO4-204ENST00000527149 CSN2P05814 226 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 MMP9P14780 707 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 GABRR1P24046 479 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 NCS1P62166 190 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 RPS27AP62979 156 aaKnown RBP13.72□□□□□ -0.21
SMCO4-204ENST00000527149 PLA2G7Q13093 441 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 GRK1Q15835 563 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 TAF9Q16594 264 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 SFXN4Q6P4A7 337 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 METAP1DQ6UB28 335 aaPredicted RBP13.72□□□□□ -0.21
SMCO4-204ENST00000527149 OR2W3Q7Z3T1 314 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 GPR141Q7Z602 305 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 OR51D1Q8NGF3 324 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 H1FXQ92522 213 aaKnown RBP13.72□□□□□ -0.21
SMCO4-204ENST00000527149 COQ2Q96H96 371 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 TM2D1Q9BX74 207 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 SELENOIQ9C0D9 397 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
SMCO4-204ENST00000527149 C2CD3Q4AC94 2353 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A10PA6NDY2 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A18PA6NE21 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A16PA6NEW6 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A20PA6NIJ5 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A8PA6NJQ4 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A7PA6NKC0 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A22PA8MWA6 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A12PA8MX19 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A5PA8MXJ8 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A23PA8MXZ1 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 MGST3O14880 152 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 OR7C1O76099 320 aaPredicted RBP13.71□□□□□ -0.21
SMCO4-204ENST00000527149 MPIG6BO95866 241 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FSHBP01225 129 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A15PP0C7V4 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A13PP0C7W8 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A14PP0C7W9 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM90A24PP0C7X0 464 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 SLC2A2P11168 524 aaPredicted RBP13.71□□□□□ -0.21
SMCO4-204ENST00000527149 ARSBP15848 533 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 RPL5P46777 297 aaKnown RBP13.71□□□□□ -0.21
SMCO4-204ENST00000527149 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
SMCO4-204ENST00000527149 PAX5Q02548 391 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 MXD1Q05195 221 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 SCN1BQ07699 218 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 FAM120AOSQ5T036 256 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 KCNG3Q8TAE7 436 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 DMRTB1Q96MA1 342 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 TMEM59Q9BXS4 323 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 SIRPDQ9H106 197 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 LPAR5Q9H1C0 372 aa13.71□□□□□ -0.21
SMCO4-204ENST00000527149 CUBNO60494 3623 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 FOXI3A8MTJ6 420 aaPredicted RBP13.7□□□□□ -0.22
SMCO4-204ENST00000527149 PPIAL4GP0DN37 164 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 ERP29P30040 261 aaKnown RBP13.7□□□□□ -0.22
SMCO4-204ENST00000527149 DLX6P56179 175 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 VBP1P61758 197 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 RPL31P62899 125 aaKnown RBP13.7□□□□□ -0.22
SMCO4-204ENST00000527149 ZNF273Q14593 569 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 C2orf76Q3KRA6 126 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 PAN3Q58A45 887 aaKnown RBP13.7□□□□□ -0.22
SMCO4-204ENST00000527149 GPR107Q5VW38 600 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 FAHD2BQ6P2I3 314 aaPredicted RBP13.7□□□□□ -0.22
SMCO4-204ENST00000527149 BTNL3Q6UXE8 466 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 KIR3DL3Q8N743 410 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 SUMF2Q8NBJ7 301 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 OR5D13Q8NGL4 314 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 FAHD2AQ96GK7 314 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 NICN1Q9BSH3 213 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 LIN7BQ9HAP6 207 aa13.7□□□□□ -0.22
SMCO4-204ENST00000527149 HSPB6O14558 160 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 IL1AP01583 271 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 LIPFP07098 398 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 RPS19P39019 145 aaKnown RBP13.69□□□□□ -0.22
SMCO4-204ENST00000527149 P2RX3P56373 397 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 EDDM3AQ14507 147 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 ATXN7L3Q14CW9 347 aaPredicted RBP13.69□□□□□ -0.22
SMCO4-204ENST00000527149 TMEM200BQ69YZ2 307 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 GDPD3Q7L5L3 318 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 RTN4RL2Q86UN3 420 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 FAM89BQ8N5H3 189 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 Q8N7P7 452 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 TPRX1Q8N7U7 411 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 OR4M1Q8NGD0 313 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 PPP1R35Q8TAP8 253 aa13.69□□□□□ -0.22
SMCO4-204ENST00000527149 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms