RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PGA5P0DJD9 388 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 IGHV1-8P0DP01 117 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 WNT4P56705 351 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 ZNF85Q03923 595 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 GPR50Q13585 617 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 IRF3Q14653 427 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 TBCEQ15813 527 aaPredicted RBP5.26□□□□□ -1.57
CD44-221ENST00000526000 TMEM244Q5VVB8 128 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 ZNF626Q68DY1 528 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 RPL22L1Q6P5R6 122 aaKnown RBP5.26□□□□□ -1.57
CD44-221ENST00000526000 LIAT1Q6ZQX7 453 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 GDPD3Q7L5L3 318 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 ZNF329Q86UD4 541 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 ZNF573Q86YE8 665 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 CALHM1Q8IU99 346 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 NANOGP1Q8N7R0 232 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 YIPF7Q8N8F6 280 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 OR52N4Q8NGI2 321 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 CAPSLQ8WWF8 208 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 SLAMF9Q96A28 289 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 C10orf35Q96D05 121 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 DUX3Q96PT4 197 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 FAM206AQ9NX38 181 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 BABAM2Q9NXR7 383 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 GAR1Q9NY12 217 aaKnown RBP5.26□□□□□ -1.57
CD44-221ENST00000526000 AASSQ9UDR5 926 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 MRM2Q9UI43 246 aaKnown RBP5.26□□□□□ -1.57
CD44-221ENST00000526000 LINC00527Q9UJ94 153 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 ENPP5Q9UJA9 477 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 GNG8Q9UK08 70 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 PITPNC1Q9UKF7 332 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 TBL2Q9Y4P3 447 aaKnown RBP5.26□□□□□ -1.57
CD44-221ENST00000526000 TSSC4Q9Y5U2 329 aaPredicted RBP5.26□□□□□ -1.57
CD44-221ENST00000526000 PQLC2LA1A4F0 135 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 TMEM212A6NML5 194 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 J3QLW9 94 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 J3QT63 122 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 K7N7A8 449 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 SRSF10O75494 262 aaKnown RBP5.25□□□□□ -1.57
CD44-221ENST00000526000 RPP14O95059 124 aaKnown RBP5.25□□□□□ -1.57
CD44-221ENST00000526000 APOL3O95236 402 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 IGHV3-7P01780 117 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 TTRP02766 147 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ISG15P05161 165 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ZNF19P17023 458 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 CCL1P22362 96 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 GABRR1P24046 479 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 PSMA1P25786 263 aaKnown RBP5.25□□□□□ -1.57
CD44-221ENST00000526000 C21orf33P30042 268 aaPredicted RBP5.25□□□□□ -1.57
CD44-221ENST00000526000 RAB25P57735 213 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ALKBH1Q13686 389 aaKnown RBP5.25□□□□□ -1.57
CD44-221ENST00000526000 HNF4GQ14541 408 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 TRAM1Q15629 374 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 CLVS2Q5SYC1 327 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 BCL2L15Q5TBC7 163 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 PRAMEF5Q5TYX0 476 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ZNF773Q6PK81 442 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 Q6ZSR3 168 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 KRT74Q7RTS7 529 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ZNF367Q7RTV3 350 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 RNF144BQ7Z419 303 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 TRAPPC6BQ86SZ2 158 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 LHFPL3Q86UP9 236 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 CATSPERDQ86XM0 798 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ELMOD2Q8IZ81 293 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 OR14K1Q8NGZ2 314 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 OR2G2Q8NGZ5 317 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 FOXRED1Q96CU9 486 aaPredicted RBP5.25□□□□□ -1.57
CD44-221ENST00000526000 PELI1Q96FA3 418 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 C4orf36Q96KX1 117 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 ZNF714Q96N38 554 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 TBX5Q99593 518 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 NRIP2Q9BQI9 281 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 COMMD4Q9H0A8 199 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 MTCH1Q9NZJ7 389 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 IL36RNQ9UBH0 155 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 OR52A1Q9UKL2 312 aa5.25□□□□□ -1.57
CD44-221ENST00000526000 IGKV1-27A0A075B6S5 117 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 IGHV2-26A0A0B4J1V2 119 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 A0A1B0GTI1 187 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 TRIM64CA6NLI5 447 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 NUDT19A8MXV4 375 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 H3BUI4 141 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SIRPB1O00241 398 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 OGG1O15527 345 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 NOS1APO75052 506 aaPredicted RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 ZNF737O75373 536 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 DHRS3O75911 302 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 IGLV3-1P01715 115 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 MT-ND2P03891 347 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SNRNP70P08621 437 aaKnown RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 HTR1DP28221 377 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 GDNFP39905 211 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 RANBP1P43487 201 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 OR3A4PP47883 348 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 ETV1P50549 477 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SCN1BQ07699 218 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 MLLT11Q13015 90 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms