RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 THBS3P49746 956 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 PRRX1P54821 245 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 RPL23AP62750 156 aaKnown RBP18.99■□□□□ 0.63
USP47-205ENST00000525257 TP53I3Q53FA7 332 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 CCDC144NLQ6NUI1 221 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 C18orf65Q6ZTR6 163 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 LHFPL2Q6ZUX7 228 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 FGGYQ96C11 551 aa18.99■□□□□ 0.63
USP47-205ENST00000525257 ZNF20P17024 532 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 KRBOX4Q5JUW0 171 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 C8orf86Q6ZUL3 223 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 UTS2BQ765I0 119 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 FAM220AQ7Z4H9 259 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 OR5D18Q8NGL1 313 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 COQ2Q96H96 371 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 NOL4LQ96MY1 436 aaPredicted RBP18.98■□□□□ 0.63
USP47-205ENST00000525257 OPALINQ96PE5 141 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 POMPQ9Y244 141 aa18.98■□□□□ 0.63
USP47-205ENST00000525257 NUDT19A8MXV4 375 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 OOSP1A8MZH6 123 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 OCM2P0CE71 109 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 OCMP0CE72 109 aaPredicted RBP18.97■□□□□ 0.63
USP47-205ENST00000525257 FAM106CPP0CH98 169 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 NFYBP25208 207 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 LMO1P25800 156 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 ATP6V1E1P36543 226 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 ATXN7L3Q14CW9 347 aaPredicted RBP18.97■□□□□ 0.63
USP47-205ENST00000525257 OR2W3Q7Z3T1 314 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 RNF144BQ7Z419 303 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 TOMM40LQ969M1 308 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 RNF166Q96A37 237 aaPredicted RBP18.97■□□□□ 0.63
USP47-205ENST00000525257 SPACA5Q96QH8 159 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 MCRIP2Q9BUT9 160 aaKnown RBP18.97■□□□□ 0.63
USP47-205ENST00000525257 COMMD4Q9H0A8 199 aa18.97■□□□□ 0.63
USP47-205ENST00000525257 A0A087X0M5 115 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 A0A1B0GX30 115 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 G3V2T6 193 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 GYG2O15488 501 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 KDM4BO94953 1096 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 SNRNP70P08621 437 aaKnown RBP18.96■□□□□ 0.63
USP47-205ENST00000525257 ISL1P61371 349 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 ZNF85Q03923 595 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 C17orf58Q2M2W7 97 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 TMEM244Q5VVB8 128 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 KDM4DQ6B0I6 523 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 OR56B4Q8NH76 319 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 RPEQ96AT9 228 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 SPSB1Q96BD6 273 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 PPIL3Q9H2H8 161 aaKnown RBP18.96■□□□□ 0.63
USP47-205ENST00000525257 NEK6Q9HC98 313 aa18.96■□□□□ 0.63
USP47-205ENST00000525257 ZNF729A6NN14 1252 aaPredicted RBP18.95■□□□□ 0.62
USP47-205ENST00000525257 SLC33A1O00400 549 aaPredicted RBP18.95■□□□□ 0.62
USP47-205ENST00000525257 CSN2P05814 226 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 DNAL1Q4LDG9 190 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 Q6P435 159 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 KLHL30-AS1Q8NEE0 82 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 OR2G2Q8NGZ5 317 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 OR9G1Q8NH87 305 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 LINC00527Q9UJ94 153 aa18.95■□□□□ 0.62
USP47-205ENST00000525257 FAM90A18PA6NE21 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A16PA6NEW6 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A20PA6NIJ5 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A9PA6NNJ1 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A12PA8MX19 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A5PA8MXJ8 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 IGHV3-7P01780 117 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A15PP0C7V4 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A13PP0C7W8 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A14PP0C7W9 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 FAM90A24PP0C7X0 464 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 DCTN2Q13561 401 aaKnown RBP18.94■□□□□ 0.62
USP47-205ENST00000525257 HES1Q14469 280 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 OR13C9Q8NGT0 318 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 CHPT1Q8WUD6 406 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 KIRREL1Q96J84 757 aa18.94■□□□□ 0.62
USP47-205ENST00000525257 SERPINE3A8MV23 424 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 MYCNOSP40205 109 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 GLP1RP43220 463 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 BNIP1Q12981 228 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 ATP6AP1Q15904 470 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 UNQ9370/PRO34162Q6UXP9 181 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 THNSL2Q86YJ6 484 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 DRAM1Q8N682 238 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 C5orf56Q8N8D9 126 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 CHST4Q8NCG5 386 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 OR10AC1Q8NH08 325 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 LEAP2Q969E1 77 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 MBOAT4Q96T53 435 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 CIB1Q99828 191 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 GABARAPL1Q9H0R8 117 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 PCDHB16Q9NRJ7 776 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 OR6C3Q9NZP0 311 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 FRRS1LQ9P0K9 344 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 ENOPH1Q9UHY7 261 aa18.93■□□□□ 0.62
USP47-205ENST00000525257 AMMECR1Q9Y4X0 333 aaPredicted RBP18.93■□□□□ 0.62
USP47-205ENST00000525257 KBTBD11-OT1A0A1B0GTJ5 212 aa18.92■□□□□ 0.62
USP47-205ENST00000525257 HSPB6O14558 160 aa18.92■□□□□ 0.62
USP47-205ENST00000525257 DEGS1O15121 323 aa18.92■□□□□ 0.62
USP47-205ENST00000525257 TMEM11P17152 192 aa18.92■□□□□ 0.62
USP47-205ENST00000525257 POLR2IP36954 125 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms