RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 VAMP1P23763 118 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 DNASE1P24855 282 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 CFHR2P36980 270 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 RBMXP38159 391 aaKnown RBP8.47□□□□□ -1.05
VPS13B-212ENST00000524330 GZMKP49863 264 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 NPY4RP50391 375 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 ZNF81P51508 661 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 UCP3P55916 312 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 SORDQ00796 357 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 DHRS2Q13268 280 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 ALKBH6Q3KRA9 238 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 FAM209AQ5JX71 171 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 TRAT1Q6PIZ9 186 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 DHRS11Q6UWP2 260 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 LHFPL1Q86WI0 220 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 SLC38A6Q8IZM9 456 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 MUC20Q8N307 709 aaPredicted RBP8.47□□□□□ -1.05
VPS13B-212ENST00000524330 ZNF565Q8N9K5 539 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 ZBTB8BQ8NAP8 495 aaPredicted RBP8.47□□□□□ -1.05
VPS13B-212ENST00000524330 OR11H7Q8NGC8 314 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 OR4A4PQ8NGN8 299 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 LILRB1Q8NHL6 650 aaPredicted RBP8.47□□□□□ -1.05
VPS13B-212ENST00000524330 PRR7Q8TB68 274 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 TMEM171Q8WVE6 324 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 PIK3IP1Q96FE7 263 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 FYTTD1Q96QD9 318 aaKnown RBP8.47□□□□□ -1.05
VPS13B-212ENST00000524330 PDCD10Q9BUL8 212 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 MSL2Q9HCI7 577 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 Q9N2K0 584 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 C1orf123Q9NWV4 160 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 DNAJB11Q9UBS4 358 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 IL19Q9UHD0 177 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 ERRFI1Q9UJM3 462 aaPredicted RBP8.47□□□□□ -1.05
VPS13B-212ENST00000524330 FZR1Q9UM11 496 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 PCDHB10Q9UN67 800 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 VSIG4Q9Y279 399 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 NPTNQ9Y639 398 aa8.47□□□□□ -1.05
VPS13B-212ENST00000524330 TEX13DA0A0J9YY54 714 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-212ENST00000524330 TMEM30CPA0ZSE6 113 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 C9orf170A2RU37 121 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 LRRC30A6NM36 301 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 OR2AT4A6NND4 320 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 H0YL77 283 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 GOSR2O14653 212 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 ABCD4O14678 606 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 RHBDL1O75783 438 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 SFT2D2O95562 160 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 PTBP3O95758 552 aaKnown RBP8.46□□□□□ -1.06
VPS13B-212ENST00000524330 OR2H2O95918 312 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 NAPSAO96009 420 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 ZBTB25P24278 435 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 TNFAIP6P98066 277 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-212ENST00000524330 CD300CQ08708 224 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 TESK1Q15569 626 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 C6orf183Q5T699 404 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 WDR86Q86TI4 376 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 BATF2Q8N1L9 274 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 OR5T2Q8NGG2 359 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 OR2T35Q8NGX2 323 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 LILRB4Q8NHJ6 448 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 CA5BP1Q8WTZ4 195 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 LRRC29Q8WV35 223 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 MITD1Q8WV92 249 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 MAFIPQ8WZ33 124 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 RDH5Q92781 318 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 MEGF10Q96KG7 1140 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 ZNF488Q96MN9 340 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 HDHD3Q9BSH5 251 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-212ENST00000524330 HES4Q9HCC6 221 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 CA10Q9NS85 328 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 OR14J1Q9UGF5 321 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 TRAPPC2LQ9UL33 140 aa8.46□□□□□ -1.06
VPS13B-212ENST00000524330 PTPRQQ9UMZ3 2332 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 FAM90A27PA6NNH2 459 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 SIRPB1O00241 398 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 SPRY3O43610 288 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 OR2A4O95047 310 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 IFNA21P01568 189 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 LMO1P25800 156 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 DUSP1P28562 367 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 FCGR2CP31995 323 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 CCKARP32238 428 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 GATA4P43694 442 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 SRPXP78539 464 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 HLA-DRB3P79483 266 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 DHODHQ02127 395 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 PPP1R1AQ13522 171 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 PDCD1Q15116 288 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 BEX5Q5H9J7 111 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 PRAMEF6Q5VXH4 476 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 SLC35E4Q6ICL7 350 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 Q6P435 159 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 BRICD5Q6PL45 260 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 WDR82Q6UXN9 313 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 GSG1LQ6UXU4 331 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 Q6ZR03 302 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 C1orf87Q8N0U7 546 aa8.45□□□□□ -1.06
VPS13B-212ENST00000524330 OR52B4Q8NGK2 314 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms