RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 ZNF649Q9BS31 505 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 MCRIP2Q9BUT9 160 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 C9orf16Q9BUW7 83 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 HCAR1Q9BXC0 346 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 GABARAPL3Q9BY60 117 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 SIRPDQ9H106 197 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 RIBC2Q9H4K1 309 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 MED20Q9H944 212 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 RAB18Q9NP72 206 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 MRPL22Q9NWU5 206 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 TVP23BQ9NYZ1 205 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 IL19Q9UHD0 177 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 MAB21L2Q9Y586 359 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 COX11Q9Y6N1 276 aa3.98□□□□□ -1.77
CTNNA1-232ENST00000522013 PLECQ15149 4684 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 IGHV3-64DA0A0J9YX35 117 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 MEIOCA2RUB1 952 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 C12orf71A8MTZ7 269 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 DLGAP1O14490 977 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 LHBP01229 141 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 LIPFP07098 398 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 CD55P08174 381 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 ZNF3P17036 446 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 ZNF32P17041 273 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 GGT2P36268 569 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 GUCA1AP43080 201 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 PCBD1P61457 104 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 LSM6P62312 80 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 PSG4Q00888 419 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 HSF2Q03933 536 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 SLC34A1Q06495 639 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 RBMS2Q15434 407 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 LRRC36Q1X8D7 754 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 SLC36A2Q495M3 483 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 PABPC1L2AQ5JQF8 200 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 TMEM255AQ5JRV8 349 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OGFRL1Q5TC84 451 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 C12orf73Q69YU5 71 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 TMEM53Q6P2H8 277 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 CORO6Q6QEF8 472 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 LYPD2Q6UXB3 125 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 KCTD9Q7L273 389 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 SLC26A10Q8NG04 563 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OR5AU1Q8NGC0 362 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OR51G2Q8NGK0 314 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OR2AJ1Q8NGZ0 328 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 AKR7LQ8NHP1 331 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 SLC25A40Q8TBP6 338 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OR2J1Q9GZK6 312 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 OR51V1Q9H2C8 321 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 DCLRE1BQ9H816 532 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 ZNF702PQ9H963 129 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 CCNB1IP1Q9NPC3 277 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 SIRT7Q9NRC8 400 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 ONECUT1Q9UBC0 465 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 ENOPH1Q9UHY7 261 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 TIMM10BQ9Y5J6 103 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 ORC6Q9Y5N6 252 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 TSSC4Q9Y5U2 329 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 SMAD5-AS1Q9Y6J3 95 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 TNCP24821 2201 aa3.97□□□□□ -1.77
CTNNA1-232ENST00000522013 IGHV4-28A0A0C4DH34 117 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 IQCMA0A1B0GVH7 501 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 A0A1B0GVI7 797 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 A0A1W2PP11 408 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 CCDC182A6NF36 153 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 OR6C6A6NF89 314 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 PRR23D1E9PI22 279 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 CASQ2O14958 399 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 NPFFO15130 113 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 RER1O15258 196 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 SGCEO43556 437 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 CHST1O43916 411 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 SELENOFO60613 162 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 GLCEO94923 617 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 SNAP29O95721 258 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 PRR23D2P0DMB1 279 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 PSKH1P11801 424 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 ZNF823P16415 610 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 PAICSP22234 425 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 SLC2A5P22732 501 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 FMO3P31513 532 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 APLNRP35414 380 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 SAA4P35542 130 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 WNT5AP41221 380 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 RPS27P42677 84 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 VDAC2P45880 294 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 HTR5AP47898 357 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 GDI2P50395 445 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 LUMP51884 338 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 BLVRAP53004 296 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 DLX1P56177 255 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 RAB25P57735 213 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 BRWD1-AS2P59051 145 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 HIST1H3AP68431 136 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 SCRN3Q0VDG4 424 aa3.96□□□□□ -1.78
CTNNA1-232ENST00000522013 GAGE2BQ13066 116 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms